Gene HS_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1339 
SymbolgdhA 
ID4240851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1531121 
End bp1532470 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content41% 
IMG OID638104913 
Productglutamate dehydrogenase 
Protein accessionYP_719551 
Protein GI113461482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.852226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCAA TCGTATCGTT AGAAGATTTT TTAGCAAAAG TAGAACAACG TGACGGTCAT 
CAACCAGAAT TTTTGCAAGC AGTACGTGAA GTATTCACTT CCATTTGGCC ATTTTTAGAG
AAAAATCCAA AATATCGCTC TGAAGCTTTA TTGGAGCGTT TAGTTGAGCC GGAACGTGCA
TTTCAATTTC GTGTCGCTTG GACAGATGAT AAAGGTCAAG TGCAAGTAAA CCGAGCATTC
CGAGTTCAAT TCAATAGTGC GATTGGACCG TTTAAAGGTG GAATGCGTTT TCATCCATCT
GTAAATTTAT CTATTTTAAA ATTTTTAGGC TTTGAGCAAA TTTTCAAAAA TGCTTTAACT
ACCTTACCGA TGGGGGGAGG TAAAGGTGGT TCCGATTTTG ATCCTAAGGG TAAGTCAGAT
GCGGAAGTCA TGCGTTTTTG TCAAGCATTA ATGGCTGAAT TATATCGTCA TGTCGGTGCA
GATACCGATG TACCGGCAGG TGATATCGGT GTAGGTGGAC GAGAAGTAGG TTATCTTGCA
GGATATATGA AAAAATTATC TAACCAAGCA GCTTGCGTGT TTACCGGTCG AGGTTTGTCA
TTTGGTGGCA GTTTAATTCG TCCGGAAGCA ACAGGTTATG GTTTAGTTTA TTTTGCTCAA
GCTATGCTTG CTGAAAAAGG ACAATCTTTC GCAGGGAAAA CAGTTGTAGT TTCCGGTTCA
GGTAACGTTG CTCAATATGC TATCGAAAAA GCCTTGCAGT TAGGGGCAAA AGTTGTCACT
TGTTCTGATA GCTCCGGCTA TGTTTATGAT CCTGAAGGCT TTACACAAGA AAAATTGACC
GCACTTTTAG ATATTAAAAA TGTAAAACGT GGTCGTGTTA AAGATTACGC TGAACAATTT
GGTTTGCAAT ACGTGGAGGG AGCTCGTCCT TGGGGAGTGA AAGCGGATAT TGCACTACCT
TGTGCAACCC AAAATGAATT GGAATTATCC GATGCACAAC AATTGATCGC CAACGGGGTT
CAACTTGTTG CAGAAGGTGC CAATATGCCA ACAACAATTG AAGCTACCGA CGCATTCTTG
GAAGCAGGCG TTTTATTTGG ACCTGGTAAG GCAGCAAATG CCGGTGGCGT TGCAACTTCC
GGTTTGGAAA TGGCACAAAG CTCACAACGT TTATACTGGA CAGCTGAGGA AGTTGACGAA
AAATTACACC GTATTATGTT GGATATTCAT GCAAATTGTA AAAAATACGG TACTGTCGAA
GGGCAAGAAA ATATTAACTA TGTTGTAGGT GCAAACGTTG CAGGCTTTGT TAAAGTAGCT
GATGCAATGT TAGCACAAGG TGTTTACTAA
 
Protein sequence
MSAIVSLEDF LAKVEQRDGH QPEFLQAVRE VFTSIWPFLE KNPKYRSEAL LERLVEPERA 
FQFRVAWTDD KGQVQVNRAF RVQFNSAIGP FKGGMRFHPS VNLSILKFLG FEQIFKNALT
TLPMGGGKGG SDFDPKGKSD AEVMRFCQAL MAELYRHVGA DTDVPAGDIG VGGREVGYLA
GYMKKLSNQA ACVFTGRGLS FGGSLIRPEA TGYGLVYFAQ AMLAEKGQSF AGKTVVVSGS
GNVAQYAIEK ALQLGAKVVT CSDSSGYVYD PEGFTQEKLT ALLDIKNVKR GRVKDYAEQF
GLQYVEGARP WGVKADIALP CATQNELELS DAQQLIANGV QLVAEGANMP TTIEATDAFL
EAGVLFGPGK AANAGGVATS GLEMAQSSQR LYWTAEEVDE KLHRIMLDIH ANCKKYGTVE
GQENINYVVG ANVAGFVKVA DAMLAQGVY