Gene HS_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1318 
SymboldctQ 
ID4240830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1509380 
End bp1509832 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content31% 
IMG OID638104892 
ProductC4-dicarboxylate transport system, small subunit 
Protein accessionYP_719530 
Protein GI113461461 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000464953 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAG ATGGTTATAT TTCCTCATTC AGAAATACAT TAACGATTAT ACTTTTTTCT 
GCCCTTGTTA TTGTTGTATC TATAGGTGTG TTTTCTAGAT TTTTAACATC ACATCCTTTC 
GCTTGGACTG AAGAACTGTC TAGATTTATT TTTATTTGGT TAGCTTGGAT AGCTTCAAGT 
TTAACAATTG CTAAGGGCAT TAATATTACA TTCGATATTG TGCTGGATAA ATTAGAACAA 
ACCGTTGGTA ATATTGCTCA TATTATTGTG AATGTTATTT CTGTCATTTA CATACTCGCA 
GTCATTATCT TGGGATATAT ACTTTGTATT AATAATACAA ATTCATACTC CCCTTTACTA 
GGTGTTCCAA TGTGGACTCT AAATCTTGCG ATACCTGTTG GTGGGGTATT GATGGTTTAT 
GAGCAAATTA AAAATTTAAT CAAGAAACGT TAA
 
Protein sequence
MKLDGYISSF RNTLTIILFS ALVIVVSIGV FSRFLTSHPF AWTEELSRFI FIWLAWIASS 
LTIAKGINIT FDIVLDKLEQ TVGNIAHIIV NVISVIYILA VIILGYILCI NNTNSYSPLL 
GVPMWTLNLA IPVGGVLMVY EQIKNLIKKR