Gene HS_1305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1305 
SymbolproS 
ID4240816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1492960 
End bp1494675 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content39% 
IMG OID638104878 
Productprolyl-tRNA synthetase 
Protein accessionYP_719517 
Protein GI113461448 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.30482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTACGA GTAAATATTT ATTATCAACA TTAAAAGAAA CCCCAAATGA TGCTCAAGTA 
GTAAGTCATC AATTGATGTT ACGGGCAGGT ATGATACGAC CTTTGGCATC CGGCTTATAT
AACTGGTTAC CCACCGGCTT ACGTGTTTTG AAAAAAGTGG AAAATATTGT TCGTGAGGAA
ATGAATAAGA GCGGTGCAAT TGAAGTTGAA ATGCCTGTTG TTCAACCGGC AGAGCTATGG
CAAGAGTCCC AACGCTGGGA GCAATATGGT CCAGAACTGT TACGTTTTGT AGATCGTGGC
AACCGTGATT TCGTCTTGGG GCCTACTCAC GAAGAAGTTA TTACCGATTT GGTGCATCGT
GAAGTCAGTT CTTATAAACA ATTACCATTG AACTTATATC AAATTCAAAC AAAATTCCGT
GATGAAGTGC GACCTCGTTT CGGCGTAATG CGTGGTCGTG AATTTTTGAT GAAGGATGCC
TATTCTTTCC ATACCAGCAA AGAATGTTTA CAAAATACCT ATGATGTCAT GTATCGAACT
TACAATAATA TTTTTACTCG TTTAGGATTA GATTTTCGTG CCGTACAAGC TGATACAGGA
TCTATTGGAG GCAGTGCATC TCATGAGTTT CAAGTACTGG CAAAAAGTGG CGAGGATGAT
ATTGTTTTTT CAAGCAATTC CGACTACGCA GCCAATATTG AATTGGCGGA AGCCGTAGCA
ATAGGTCAAC GCCAGGCACC GAGTGCAACT ATGGAGTTAG TAGATACACC AAATGCAAAA
ACTATTAATG ACTTAGTTGA ACAATTTAAT TTATCTGTGG AAAAAACAGT TAAAACACTA
ATCGTAAAAG GTGCAAATGA AGGCCAACCT CTTATCGCAT TGATTGTACG TGGAGATCAT
GAGTTAAACG AAGTCAAAGC ACAAAAATTA CCGGAAGTCG CCGATCCTCT AGAATTTGCA
AATGAAGACG AAATAAAAAC AAAAATTGGT GCCAGTATAG GATCGTTAGG GCCTGTGAAT
CTACCAATTC CGGCTATTAT TGATCGCTCC GTGGCACTCA TGAGCGATTT CAGCACTGGT
GCGAACATTG ATGGCAAACA TTACTTTAAT GTTAACTGGG ATCGTGATGT TGCCTTACCT
AAAGTTGCAG ACTTACGTAA TGTTGTAGAA GGCGATCCAA GTCCTGATGG CAAAGGTACT
TTACAGATTA AGCGAGGTAT TGAAGTTGGG CATATTTTCC AATTAGGTAC AAAATATTCG
GAGGCAATGA AAGCAACTGT ACAAGGTGAG GATGGTCGCC CACAAACGAT GATTATGGGC
TGCTACGGCA TCGGAGTAAG TCGTGTTGTT GCTGCTACTA TTGAGCAGTG CCATGATGAA
AAAGGAATTA TTTGGTCTTC TGATGAAATT GCACCGTTCA CTGTAGCAAT TATCCCAATG
AATATGTATA AGTCAAAAAA TGTACAAATT TTTGCTGAAG AATTGTATCA GAGCTTACTC
AATAAAAATG TAGATGTTAT CTTTGATGAT CGAAAAGAGC GTCCCGGAGT GATGTTTGCG
GATATGGAAT TGATAGGTGT TCCTCATATG ATTGTTATTG GTGAAAAAAA TTTAGAAAAA
GGCGAAATTG AATATAAAAA TCGTCGTACG GGTGAAAAAC AAATAATTGC TAAAGAGCAG
GTATTAGATT TCCTTGCCCA ACGAGTTAAC GCTTGA
 
Protein sequence
MRTSKYLLST LKETPNDAQV VSHQLMLRAG MIRPLASGLY NWLPTGLRVL KKVENIVREE 
MNKSGAIEVE MPVVQPAELW QESQRWEQYG PELLRFVDRG NRDFVLGPTH EEVITDLVHR
EVSSYKQLPL NLYQIQTKFR DEVRPRFGVM RGREFLMKDA YSFHTSKECL QNTYDVMYRT
YNNIFTRLGL DFRAVQADTG SIGGSASHEF QVLAKSGEDD IVFSSNSDYA ANIELAEAVA
IGQRQAPSAT MELVDTPNAK TINDLVEQFN LSVEKTVKTL IVKGANEGQP LIALIVRGDH
ELNEVKAQKL PEVADPLEFA NEDEIKTKIG ASIGSLGPVN LPIPAIIDRS VALMSDFSTG
ANIDGKHYFN VNWDRDVALP KVADLRNVVE GDPSPDGKGT LQIKRGIEVG HIFQLGTKYS
EAMKATVQGE DGRPQTMIMG CYGIGVSRVV AATIEQCHDE KGIIWSSDEI APFTVAIIPM
NMYKSKNVQI FAEELYQSLL NKNVDVIFDD RKERPGVMFA DMELIGVPHM IVIGEKNLEK
GEIEYKNRRT GEKQIIAKEQ VLDFLAQRVN A