Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1305 |
Symbol | proS |
ID | 4240816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1492960 |
End bp | 1494675 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104878 |
Product | prolyl-tRNA synthetase |
Protein accession | YP_719517 |
Protein GI | 113461448 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.30482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTACGA GTAAATATTT ATTATCAACA TTAAAAGAAA CCCCAAATGA TGCTCAAGTA GTAAGTCATC AATTGATGTT ACGGGCAGGT ATGATACGAC CTTTGGCATC CGGCTTATAT AACTGGTTAC CCACCGGCTT ACGTGTTTTG AAAAAAGTGG AAAATATTGT TCGTGAGGAA ATGAATAAGA GCGGTGCAAT TGAAGTTGAA ATGCCTGTTG TTCAACCGGC AGAGCTATGG CAAGAGTCCC AACGCTGGGA GCAATATGGT CCAGAACTGT TACGTTTTGT AGATCGTGGC AACCGTGATT TCGTCTTGGG GCCTACTCAC GAAGAAGTTA TTACCGATTT GGTGCATCGT GAAGTCAGTT CTTATAAACA ATTACCATTG AACTTATATC AAATTCAAAC AAAATTCCGT GATGAAGTGC GACCTCGTTT CGGCGTAATG CGTGGTCGTG AATTTTTGAT GAAGGATGCC TATTCTTTCC ATACCAGCAA AGAATGTTTA CAAAATACCT ATGATGTCAT GTATCGAACT TACAATAATA TTTTTACTCG TTTAGGATTA GATTTTCGTG CCGTACAAGC TGATACAGGA TCTATTGGAG GCAGTGCATC TCATGAGTTT CAAGTACTGG CAAAAAGTGG CGAGGATGAT ATTGTTTTTT CAAGCAATTC CGACTACGCA GCCAATATTG AATTGGCGGA AGCCGTAGCA ATAGGTCAAC GCCAGGCACC GAGTGCAACT ATGGAGTTAG TAGATACACC AAATGCAAAA ACTATTAATG ACTTAGTTGA ACAATTTAAT TTATCTGTGG AAAAAACAGT TAAAACACTA ATCGTAAAAG GTGCAAATGA AGGCCAACCT CTTATCGCAT TGATTGTACG TGGAGATCAT GAGTTAAACG AAGTCAAAGC ACAAAAATTA CCGGAAGTCG CCGATCCTCT AGAATTTGCA AATGAAGACG AAATAAAAAC AAAAATTGGT GCCAGTATAG GATCGTTAGG GCCTGTGAAT CTACCAATTC CGGCTATTAT TGATCGCTCC GTGGCACTCA TGAGCGATTT CAGCACTGGT GCGAACATTG ATGGCAAACA TTACTTTAAT GTTAACTGGG ATCGTGATGT TGCCTTACCT AAAGTTGCAG ACTTACGTAA TGTTGTAGAA GGCGATCCAA GTCCTGATGG CAAAGGTACT TTACAGATTA AGCGAGGTAT TGAAGTTGGG CATATTTTCC AATTAGGTAC AAAATATTCG GAGGCAATGA AAGCAACTGT ACAAGGTGAG GATGGTCGCC CACAAACGAT GATTATGGGC TGCTACGGCA TCGGAGTAAG TCGTGTTGTT GCTGCTACTA TTGAGCAGTG CCATGATGAA AAAGGAATTA TTTGGTCTTC TGATGAAATT GCACCGTTCA CTGTAGCAAT TATCCCAATG AATATGTATA AGTCAAAAAA TGTACAAATT TTTGCTGAAG AATTGTATCA GAGCTTACTC AATAAAAATG TAGATGTTAT CTTTGATGAT CGAAAAGAGC GTCCCGGAGT GATGTTTGCG GATATGGAAT TGATAGGTGT TCCTCATATG ATTGTTATTG GTGAAAAAAA TTTAGAAAAA GGCGAAATTG AATATAAAAA TCGTCGTACG GGTGAAAAAC AAATAATTGC TAAAGAGCAG GTATTAGATT TCCTTGCCCA ACGAGTTAAC GCTTGA
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Protein sequence | MRTSKYLLST LKETPNDAQV VSHQLMLRAG MIRPLASGLY NWLPTGLRVL KKVENIVREE MNKSGAIEVE MPVVQPAELW QESQRWEQYG PELLRFVDRG NRDFVLGPTH EEVITDLVHR EVSSYKQLPL NLYQIQTKFR DEVRPRFGVM RGREFLMKDA YSFHTSKECL QNTYDVMYRT YNNIFTRLGL DFRAVQADTG SIGGSASHEF QVLAKSGEDD IVFSSNSDYA ANIELAEAVA IGQRQAPSAT MELVDTPNAK TINDLVEQFN LSVEKTVKTL IVKGANEGQP LIALIVRGDH ELNEVKAQKL PEVADPLEFA NEDEIKTKIG ASIGSLGPVN LPIPAIIDRS VALMSDFSTG ANIDGKHYFN VNWDRDVALP KVADLRNVVE GDPSPDGKGT LQIKRGIEVG HIFQLGTKYS EAMKATVQGE DGRPQTMIMG CYGIGVSRVV AATIEQCHDE KGIIWSSDEI APFTVAIIPM NMYKSKNVQI FAEELYQSLL NKNVDVIFDD RKERPGVMFA DMELIGVPHM IVIGEKNLEK GEIEYKNRRT GEKQIIAKEQ VLDFLAQRVN A
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