Gene HS_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1302 
Symbol 
ID4240813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1489174 
End bp1491093 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content38% 
IMG OID638104875 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_719514 
Protein GI113461445 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTT TTACAAATTT AACTTTAAAG CGTGGAAATA CCTTACTCTT AGAAAATACC 
TGTGCCACTA TTAACCCCGG TCAAAAAGTT GGCTTAGTCG GAAAAAACGG TTGTGGTAAA
TCTTCTTTAT TTGCACTACT CAAAAAAGAA ATGAGTGCGG AAGAAGGTGA TATAACTTTT
CCAAATCACT GGGCAATGGC TTGGGTAAAT CAAGAAACAC CTGCCTTAGA AATAAGTGCG
TTAGATTATG TTATCAAAGG CGATCGTGAA TATTGCAAAT TACAAAAGGC CTTAGCAACT
GCTACCGAAA ATAATCATGG CAATGATATT GCCCGTATTC ATGCACAATT AGACACAATT
GATGCTTGGA CAATTCAAGC GAGAGCGGCT TCTCTTTTAC ATGGATTGGG GTTTTCTCAA
GAGGATTTAA CAAGAACGGT TAAATCTTTC TCGGGCGGTT GGCGTATGCG TCTTAACCTT
GCACAAGCCC TGCTTTGTCG CTCTGATTTA CTCTTATTAG ACGAACCGAC AAACCATTTA
GACTTAGATG CTGTCATTTG GTTAGAACGT TGGTTAATTC AATATCAAGG CACCTTGATT
TTAATTTCAC ATGACCGTGA TTTTCTTGAT CCTATTGTGA ATAAGATCAT TCATATTGAA
CAACATAAAC TGCATGAATA CAGTGGCAAT TATTCTTCCT TTGAAGTGCA ACGTGCAACA
AAATTAGCAC AACAAACCGC ACTTTATCGC CAACAGCAAC AAAAAATAAA CCATCTACAA
AAATATATCG ATCGCTTTAA AGCCAAAGCA ACTAAAGCCA AACAAGCACA AAGTCGAGTC
AAAGCCTTAG AACGAATGGA ACTTATTGCA CCTGCTTATG TAGATAATCC TTTTACCTTT
AAATTTCGTG AACCGCTCGC TTTACCCAAT CCCTTGGTTT CCATTGAAAA AGCCAGTGCA
GGTTATAACA ATGGAGAAAG TACGGTGGAA ATTTTACAAA AAATTAAGCT CAATTTAGTA
CCAGGATCTC GTATCGGGTT GCTCGGTAAA AATGGTGCGG GCAAATCTAC GTTAATTAAA
TTATTGGCAG GAGAATTGAC CGCACTTTCC GGCCACATCC AATTAGCAAA AGGCGTACAA
TTAGGGTACT TTGCACAGCA TCAATTGGAT ACGCTACGTT CGGAAGAAAA CGCACTCTGG
CATATGCAAA AAATTGCTCC CCAACAAACA GAACAACAAT TACGTGATTA CTTGGGCAGT
TTTGCGTTCC ATGGCGACAA AGTAAATCAA GCCGTTTCTT CTTTTTCCGG CGGTGAAAAA
GCCCGCTTGG TTCTAGCAAT TATTGTTTGG CAACGTCCAA ATTTACTCCT GTTGGACGAA
CCGACCAACC ATTTAGATTT AGACATGCGT CAAGCCTTGA CAGAAGCATT AATAGATTAT
CAAGGTTCAT TAATCGTGGT TTCCCACGAT CGCCATTTAC TGCGTAATAC AGTAGAAGAA
TTTTATTTGG TTCATGATAA ACAAGTTGAG GAATTTACAG GCGATTTAGA AGACTATCAA
AAATGGCTAA ATGAAATTAA TAGCACGCCG AAGCACAACG AAAAAATCAT CAATAATAAC
GAAAACACCG GTAATCATCG CAAAGAACAA AAAAGAAAAG AAGCTGAACT GCGTCAACGG
AGTGCACCAT TACGAAAAGA AATTGCCGAT ATTGAACGCA AAATGCAAAT ATATCAACAA
AAACTACAAG AAATTGAATT ACTTCTTTCC GATACAGTGC TTTATCAGAC AGAAAATAAA
GCAAAACTCA CCGCACTTTT AAATGAACAG GTTCAGCTTA AAAAAGCACT TGAAGATATA
GAAATTTCAT GGTTCACAAT GCAAGAAGCA TTAGAAAATT TGATTAATAA TATAGAATAA
 
Protein sequence
MILFTNLTLK RGNTLLLENT CATINPGQKV GLVGKNGCGK SSLFALLKKE MSAEEGDITF 
PNHWAMAWVN QETPALEISA LDYVIKGDRE YCKLQKALAT ATENNHGNDI ARIHAQLDTI
DAWTIQARAA SLLHGLGFSQ EDLTRTVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL
DLDAVIWLER WLIQYQGTLI LISHDRDFLD PIVNKIIHIE QHKLHEYSGN YSSFEVQRAT
KLAQQTALYR QQQQKINHLQ KYIDRFKAKA TKAKQAQSRV KALERMELIA PAYVDNPFTF
KFREPLALPN PLVSIEKASA GYNNGESTVE ILQKIKLNLV PGSRIGLLGK NGAGKSTLIK
LLAGELTALS GHIQLAKGVQ LGYFAQHQLD TLRSEENALW HMQKIAPQQT EQQLRDYLGS
FAFHGDKVNQ AVSSFSGGEK ARLVLAIIVW QRPNLLLLDE PTNHLDLDMR QALTEALIDY
QGSLIVVSHD RHLLRNTVEE FYLVHDKQVE EFTGDLEDYQ KWLNEINSTP KHNEKIINNN
ENTGNHRKEQ KRKEAELRQR SAPLRKEIAD IERKMQIYQQ KLQEIELLLS DTVLYQTENK
AKLTALLNEQ VQLKKALEDI EISWFTMQEA LENLINNIE