| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1295 |
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| Symbol | srmB |
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| ID | 4240806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1482970 |
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| End bp | 1484295 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638104868 |
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| Product | ATP-dependent RNA helicase SrmB |
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| Protein accession | YP_719507 |
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| Protein GI | 113461438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAA CGCAATTTGA AGACTTCGAT CTTGCCCCTC AATTACTAAA AGCCCTTGCC
CAAAAAGGCT ATTCTCGACC CACAGTCATT CAACTTGATG CTATTCCTGC CATCATGGAA
GCGAGAGATG TTTTAGGTTC TGCACCGACA GGGACAGGAA AAACAGCGGC ATTTTTGTTA
CCTGCTCTTC AGCATTTGTT AGATTATCCA CGTCGTAAAC CCGGCCCTCC TCGAATTTTA
GTTCTTACGC CAACACGTGA GCTGGCTATG CAAGTTGCTG AACAAGCGGA AGAGTTGGCT
CAATTTACTC ATTTAAGTAT TGCGACGATT ACTGGTGGTG TGGCTTATCA AAATCATGGT
GAAGTGTTTA ATAAAAACCA AGATATTGTT GTTGCTACAC CGGGACGCTT ACTGCAATAT
ATTAAAGAAG AAAACTTTGA TTGTAGAGCC GTTGAAATAC TCATTTTTGA CGAGGCGGAT
CGTATGTTGC AAATGGGGTT TGGTCAATAT GCAGAAGAAA TTGCGGCAGA AACTCGTTGG
CGTCGGCAAA CCTTGTTGTT TTCCGCTACG CTTGAAGGTG AGTTATTAGT GGATTTTGCC
TCTCGCTTAC TGAAAGATCC GGTGCAATTT AATGCGGAGC CAAGTCGTCG TGAACGTAAA
AAAATTAATC AATGGTATTA TCATGCAGAT AGCAATGAAC ATAAAATTAA ACTCCTTGCA
CGTTTTATTG AAAATGAACA AGTAAGTCGT GGTATTGTAT TTGTTCGTCG TCGTGAAAAC
GTGCGTGAAT TGTCTGAAAT TTTACGCAAA CGTGGTATTC GTAGCACTTA CTTAGAAGGT
GAAATGGCAC AAACTCAGCG TACTAAGGCT ATTGATAAAC TGAAAAATGA TGTGGTTACT
GTGTTAGTTG CTACCGATGT TGCAGCTCGT GGCATTGATA TTGATGATGT CAGTCATGTC
ATGAATTTTG ATTTACCTTA TAACGCCGAT ACTTATTTGC ATCGTGTCGG ACGTACCGCA
AGAGCAGGCA AAAAAGGTAC CGCAGTATCT TTTGTTGAAG CACATGACTA TAAATTATTA
GGCAAAATAA AACGTTATAC CGGAGAGTTG CTAAAACCTC GTATCATAGA GGGCTTAGAA
CCGAGAACCA ATCCACCCAA AGATGGTGAG ATAAAAACGG TGAGTAAAAA GCAAAAGAAC
CGAGCTAAAA CTAAGTTGGA AGAAAATAAA AAAGCGGCAC GGAAGAAAAA ACAAAAACTT
CGCCATAAAG ACATAAAAAA CATTGGTAAA CGTCGCAAGC CAAGCGAAAA AATCGCAACA
GAATAA
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| Protein sequence | MTSTQFEDFD LAPQLLKALA QKGYSRPTVI QLDAIPAIME ARDVLGSAPT GTGKTAAFLL
PALQHLLDYP RRKPGPPRIL VLTPTRELAM QVAEQAEELA QFTHLSIATI TGGVAYQNHG
EVFNKNQDIV VATPGRLLQY IKEENFDCRA VEILIFDEAD RMLQMGFGQY AEEIAAETRW
RRQTLLFSAT LEGELLVDFA SRLLKDPVQF NAEPSRRERK KINQWYYHAD SNEHKIKLLA
RFIENEQVSR GIVFVRRREN VRELSEILRK RGIRSTYLEG EMAQTQRTKA IDKLKNDVVT
VLVATDVAAR GIDIDDVSHV MNFDLPYNAD TYLHRVGRTA RAGKKGTAVS FVEAHDYKLL
GKIKRYTGEL LKPRIIEGLE PRTNPPKDGE IKTVSKKQKN RAKTKLEENK KAARKKKQKL
RHKDIKNIGK RRKPSEKIAT E
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