Gene HS_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1293 
Symbol 
ID4240804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1481221 
End bp1482084 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content39% 
IMG OID638104866 
Producthypothetical protein 
Protein accessionYP_719505 
Protein GI113461436 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTACA GTATGACGGC CTTTGCTCGT GTTGAAATTA AAAAAGAATG GGGGGATGCC 
GTATGGGAAA TTCGCTCGGT CAATCAACGT TATTTAGAAA CCTTTTTTCG TTTACCGGAG
CAATTTCGAG GATTGGAAAA TACTTTGCGT GAAAAATTAC GGCAAAAACT GGCTCGAGGT
AAAATCGAAT GTAGCTTGCG TATTGACACT AAAAAACAAA CCGCACTCAA CTTAAATCTT
AATCAAAAGT TCGCCAAACA GGTTATTCAA TCTTTGCAAT ATATAAAAGC ACAAGCCGGA
GAGGGTGAAA TCAATCTGAT GGATATTTTA CGCTACCCCG GTGTAGTGGA AACGCCGGAA
CAAGACTTGG ACAGTATCAT CGAAGATTTG TTGCAAGCCT TTGATGATTT GCTTGTGGAG
TTTATTGCAA CACGAGCTCG TGAGGGAGAA AAAGTTCAAA AATTAATTGA ACAACGCCTT
ATGGCAATTT CCGTTGAGGC ACAAAAAGTG CGGTCTTTTA TGCCGGAAAT ATTGCAATGG
CAACGAGATC GTTTGCAACA ACGTTTTGAT GAAATTCAAT TACAAGCAGA TACACAACGT
ATTGAACAAG AAATGGTGCT ATTGGCACAA CGTATTGATA TAGCTGAAGA GCTGGATCGG
CTACAATTAC ATGTAAAAGA AACATACGCT ATTTTGCACA AAGGCGGGGC TGTCGGGCGT
AAACTTGATT TTATGATGCA AGAACTTAAT CGTGAAAGTA ATACGCTTGC GTCTAAATCT
ATTAACGCCG ATATTACCTC ATCAGCGGTT GAATTAAAGG TCTTAATTGA ACAAATGCGT
GAACAAATCC AAAATCTTGA ATAA
 
Protein sequence
MIYSMTAFAR VEIKKEWGDA VWEIRSVNQR YLETFFRLPE QFRGLENTLR EKLRQKLARG 
KIECSLRIDT KKQTALNLNL NQKFAKQVIQ SLQYIKAQAG EGEINLMDIL RYPGVVETPE
QDLDSIIEDL LQAFDDLLVE FIATRAREGE KVQKLIEQRL MAISVEAQKV RSFMPEILQW
QRDRLQQRFD EIQLQADTQR IEQEMVLLAQ RIDIAEELDR LQLHVKETYA ILHKGGAVGR
KLDFMMQELN RESNTLASKS INADITSSAV ELKVLIEQMR EQIQNLE