Gene HS_1289 details

Gene Information

• Locus tag: HS_1289
• Symbol: efp
• ID: 4240800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1477875
• End bp: 1478441
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638104862
• Product: elongation factor P
• Protein accession: YP_719501
• Protein GI: 113461432
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0131068
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACAT ATACTACCAG TGATTTTAAA CCAGGTCTAA AATTTATGCA GGACGGTGAG 
CCTTGCGTTA TTATTGAAAA TGAATTTGTT AAACCGGGTA AAGGGCAAGC GTTCACTCGC 
ACCCGTATCC GTAAATTAAT TTCAGGCAAA GTATTGGATG TCAACTTTAA ATCTGGTACA 
TCAGTTGAAG CGGCAGATGT AATGGACTTA AACCTGACTT ACTCCTATAA AGATGAAGCG 
TTTTGGTATT TTATGCATCC TGAAACCTTT GAACAATACT CTGCTGATGC CAAAGCGGTA 
GGTGATGCGG AAAAATGGTT GCTGGATCAA GCAGATTGTA TTGTAACCTT ATGGAATGGT 
GCACCTATAA CGATTACACC GCCTAATTTC GTTGAGTTGG AAGTTGTTGA AACCGATCCT 
GGCTTAAAAG GTGATACAGC GGGAACTGGA GGCAAACCGG CAACATTAAG TACAGGTGCG 
GTAGTGAAAG TACCTCTATT TGTACAAATT GGCGAAGTGA TTAAAGTTGA TACCCGTTCA 
GGTGAATATG TTTCTCGTGT AAAATAA 

 

Protein sequence

MATYTTSDFK PGLKFMQDGE PCVIIENEFV KPGKGQAFTR TRIRKLISGK VLDVNFKSGT 
SVEAADVMDL NLTYSYKDEA FWYFMHPETF EQYSADAKAV GDAEKWLLDQ ADCIVTLWNG 
APITITPPNF VELEVVETDP GLKGDTAGTG GKPATLSTGA VVKVPLFVQI GEVIKVDTRS 
GEYVSRVK