| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1271 |
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| Symbol | |
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| ID | 4240782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1456960 |
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| End bp | 1458546 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638104844 |
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| Product | ABC transporter, periplasmic binding protein |
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| Protein accession | YP_719483 |
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| Protein GI | 113461414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000259921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATT ACATTGAAAA TGAATCTCGC CGTAATTTCA TGAAAGTATT GGCTGGTGTC
GGTGCAGGAA TTGCCTTTAG CGGTACATTA GGTAGTTTTG TTTCTAAGGC GAAGGCCACT
TCAACAACAG GTAGTAGCAT TGAAGCAGGA ATAGCTTATC CCCTATCAAC CGGTTTTGAT
CCGTCCACTT CCAGTGGAGC CTCTTCCTTT GCCGCCAACA TGCACTTTTT TGAAGGATTA
GTGGATTTAC ACCCTGCCAC CCGTGAACCT TATCTCGCCT TAGCTGCAAA AGAACCTGAA
CAAGTTGATG ATATAACATG GCGTGTTACA TTACGTGACG GTGCGACTTT CCACGATGGT
ACACCTGTTA CCACGGAGGA TATAGTATAT TCTTATCAGC GTATTTTAGA TCCAAAAAAT
GCTTCACTAT TTATACAATT CATTCCGTTT ATTGATTCAG TCAACGCTTT AGATGATAAA
GTGGTAGAAT TTAAGTTGAA GTACCCGTTT TCTCTTTTTA AATTGCGATT AGGTATTGTA
AAAATTGTAC CTAAACATGT GATTGAGGCT GTAGGACAAA CGGTATTTGA TGCAAATCCG
GTAGGATCCG GACCATATAA ATTTGTTTCA GCCGTAAAAG ACGATCGCAT CGTATTTGCC
GCACACAATG CTTACAACGG CCCATATCCT GCTCGTGTAG AAAAAATGAC ATGGTTTTTA
CTATCCGATG ATGCCGCTCG CACAGCGGCA CAAGAGTCCG GACGTACTCA AGCAATGGAA
AGTGTTCCTT ATTTAGACGT ATCTCGCTTA AAACGTAAAA GTGCGGTTGA ATCCGTGCAA
TCTTTCGGGT TGTTATTCTT AATGTTTAAT TGTAAGAAAG CCCCATTTAA CAATCCCAAA
GTACGTCAAG CTTTACACTA TGCACTGGAT ACACAAAAAT TAATTGATAT TGTATTCTTA
GGTAATGCAA AAGCCGCCAC TTCTTACACT CAAGATACGC ATCCTGATTA TGTCAAGGCT
TCAACCCAGT ATGATTATAA TCCTGAAAAA GCCACCGCGC TTTTAAAAGA AGCAGGTCTG
AATAAATTAG AGTTTCAATT GCTTTCTACA GATCATTCTT GGATAAAAGA ATGTGCCCCT
TTAGTTTTAG AATCTTGGAA TAAAATTCCG GGTGTGAAAG TAACTTTACA GCATCTACAA
TCTGGAGCAT TGTATGGTGG TTACGTAGAT AAAGGAAATT ATGAAGTCGT AATGGCACCG
GGGGATCCAT CAGTATTTAG CAACGATTTG GATCTCTTAT TGAGCTGGTG GTATCGTGGT
GATGTTTGGC CGAAAAAACG CTTCGGTTGG TCAGATACCC CTGAATATGC GAAATTGCAA
TTATTACTTG ATGATGCAAT TAAAGCAAAA CAGCCATCAG ATGCAAAAGC GGCTTGGACT
CAGGCTATTA ATCTTATTGC TGAACAAGTA CCGCTTTATC CAATTTTGCA CCGTAAATTA
CCAACCGCTT GGAATAACAA ATCACTAGAT GGTTTCCAAC CAATTCCAAC TACCGGACTT
TCATTTATTG GTGTAGGTCG CAAATAA
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| Protein sequence | MTNYIENESR RNFMKVLAGV GAGIAFSGTL GSFVSKAKAT STTGSSIEAG IAYPLSTGFD
PSTSSGASSF AANMHFFEGL VDLHPATREP YLALAAKEPE QVDDITWRVT LRDGATFHDG
TPVTTEDIVY SYQRILDPKN ASLFIQFIPF IDSVNALDDK VVEFKLKYPF SLFKLRLGIV
KIVPKHVIEA VGQTVFDANP VGSGPYKFVS AVKDDRIVFA AHNAYNGPYP ARVEKMTWFL
LSDDAARTAA QESGRTQAME SVPYLDVSRL KRKSAVESVQ SFGLLFLMFN CKKAPFNNPK
VRQALHYALD TQKLIDIVFL GNAKAATSYT QDTHPDYVKA STQYDYNPEK ATALLKEAGL
NKLEFQLLST DHSWIKECAP LVLESWNKIP GVKVTLQHLQ SGALYGGYVD KGNYEVVMAP
GDPSVFSNDL DLLLSWWYRG DVWPKKRFGW SDTPEYAKLQ LLLDDAIKAK QPSDAKAAWT
QAINLIAEQV PLYPILHRKL PTAWNNKSLD GFQPIPTTGL SFIGVGRK
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