Gene HS_1252 details

Gene Information

• Locus tag: HS_1252
• Symbol: mtlA
• ID: 4240763
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1435375
• End bp: 1437252
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638104825
• Product: mannitol-specific IIABC component, PTS system
• Protein accession: YP_719464
• Protein GI: 113461395
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2213] Phosphotransferase system, mannitol-specific IIBC component; [COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain
• TIGRFAM ID: [TIGR00851] PTS system, mannitol-specific IIC component

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000146575
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTATCAG CAAATGCAAA AGTCAAAATC CAAAGTGTTG GACGTTTCTT ATCAAATATG 
GTGATGCCTA ACATTGGGGC ATTTATTGCG TGGGGTTTTA TCACCGCACT TTTTATTCCG 
ACAGGGTGGT TGCCAAATGA AACCTTGGCG AAGTTAGTCG GACCAATGAT AATGTACTTA 
CTGCCATTAT TAATCGGTTA TACTGGCGGT AAATTAGTTG GTGGAGAGCG TGGTGCAGTA 
GTCGGGGCGA TTACTACTGC CGGTGTGATC GTCGGTACGG ATATTCCAAT GTTCCTTGGT 
GCAATGATCG CAGGTCCAAC CGGTGGCTGG GCAATTAAAC GTTTTGACAA ATGGGCTGAT 
GGCAAAATCA AAAGCGGTTT TGAGATGTTA GTCAATAACT TCTCTTCCGG TATTATTGGA 
ATGATTTTAG CCATTCTATT CTTCTGGATT ATCGGACCAG CTGTAAAAGT AGTTTCCGGT 
TGGTTGGCTA GCGGTGTAGA TGTACTTGTT CAAGCAGGCT TATTGCCACT CACCTCAATT 
TTCGTCGAAC CTGCAAAAAT CTTGTTTTTA AACAATGCAA TTAACCATGG TATTTTTTCA 
CCGTTAGGTA TCCAACAATC ACAAGAATTA GGTCAATCTG TTTTCTTCCT AATTGAAGCG 
AACCCCGGTC CGGGCTTGGG CGTGTTGTTA GCTTATATGT TATTCGGTAA AGGGTCTGCC 
AAACAAACTT CCGGCGGTGC TGCTGTAATT CACTTCTTTG GAGGTATCCA CGAAATTTAT 
TTTCCTTATG TGTTAATGAA CCCACGTTTA TTAATTGCAG TGATTGCAGG TGGTGCAACA 
GGCGTATTTA CATTGGTATT ATTTAATGCA GGCTTACAAG CACCAGCATC TCCGGGGTCA 
ATTATTGCCG TGTTAGCTAT GACACCGAAA ACCTCTTTCA TCGGTGTGAT TTTATCTGTT 
ATCGCCTCTT GTACCGTATC TTTCGTCATT TCTTCTTTCT TCTTGAAAAT TTCAAAAGAA 
GAAAGCAAAA ATACCCTAGA AGAAATGCAA GTAGCTTCTA AAGCAATGAA AGGTGGTAAT 
ACAGCAACGA AAAGTGCGGT GATAGATTTG AACGAGGTGA AAAAAATCTT TGTTTCTTGC 
GATGCCGGTA TGGGGTCTAG TGCAATGGGT GCCGGAATGT TACGTAAAAA AGTAAAAGAT 
GCTGGCTTGA CAATTGATGT AACTAACTGT GCGATTAATG ATTTACCGGA AGATGCCCGT 
TTAGTTATTA CTCATCAAGA TTTAACCTTG CGTGCGAAAA AACAAGTTCC GAATGCAATA 
CATTTGTCAT TACAAAACTT CTTAGATAAC AAATTCTACG ACAGTTTAGT GCTTGATTTG 
CAAGCTGCAA CAAAAGATAC TGTAGTACCG ATAGCGGAAG AAAATGCGAT TGACGTCAAG 
GGTACAACAT TTACTCTTAA CGCAGAGCAA ATTTTCTTGG GCTTGAATGC AGACAGCAAA 
GCGGATGCAA TTCGTTTCGC CGGTGAGCAA TTGGTGAAAT TTGGTTTCGT GCAACCAAGC 
TATATTGATG CAATGTTTGC TCGTGAAGAA TTAGTTTCTA CTTACTTAGG TGAAGGTTTA 
GCCGTGCCAC ACGGAACAGC AGAAGCAAAA GATGCGGTGT TGAAAACCGG TATTGTAGTT 
TGCCAATATC CACAAGGCGT TCGTTTTACC GACGAAGAAG ACGGCGTAGC GAAATTAGTA 
ATCGGGATTG CGGCGAAAGG CAATGAGCAT ATTCAAGTAC TAACCGCAAT TACTAACGCA 
TTGGATAGCG AAGAAGCCAT TGCAATACTA ACATCAACTG ATGATATAGA AAAAGTGCTG 
ACCTTATTGA AAGCTTAA 

 

Protein sequence

MLSANAKVKI QSVGRFLSNM VMPNIGAFIA WGFITALFIP TGWLPNETLA KLVGPMIMYL 
LPLLIGYTGG KLVGGERGAV VGAITTAGVI VGTDIPMFLG AMIAGPTGGW AIKRFDKWAD 
GKIKSGFEML VNNFSSGIIG MILAILFFWI IGPAVKVVSG WLASGVDVLV QAGLLPLTSI 
FVEPAKILFL NNAINHGIFS PLGIQQSQEL GQSVFFLIEA NPGPGLGVLL AYMLFGKGSA 
KQTSGGAAVI HFFGGIHEIY FPYVLMNPRL LIAVIAGGAT GVFTLVLFNA GLQAPASPGS 
IIAVLAMTPK TSFIGVILSV IASCTVSFVI SSFFLKISKE ESKNTLEEMQ VASKAMKGGN 
TATKSAVIDL NEVKKIFVSC DAGMGSSAMG AGMLRKKVKD AGLTIDVTNC AINDLPEDAR 
LVITHQDLTL RAKKQVPNAI HLSLQNFLDN KFYDSLVLDL QAATKDTVVP IAEENAIDVK 
GTTFTLNAEQ IFLGLNADSK ADAIRFAGEQ LVKFGFVQPS YIDAMFAREE LVSTYLGEGL 
AVPHGTAEAK DAVLKTGIVV CQYPQGVRFT DEEDGVAKLV IGIAAKGNEH IQVLTAITNA 
LDSEEAIAIL TSTDDIEKVL TLLKA