Gene HS_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1249 
Symbolmpl 
ID4240760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1432081 
End bp1433457 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content40% 
IMG OID638104822 
ProductUDP-N-acetylmuramate:L-alanyl-gamma-d-glutamayl- medo-diaminopimelate 
Protein accessionYP_719461 
Protein GI113461392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAATA AGCATCTTCA TATTTTGGGT ATCTGTGGCA CTTTCATGGG GGGAGTAGCT 
ATCATTGCCA AACAAATGGG CTATAAAATC ACAGGGTCAG ACACGAATAT TTACCCTCCG
ATGAGTACTT TTTTACAACA AAATGGTATT GAAATCATAC CGCACTTTGA CGTTTCGCAG
TTGCAACCAG CACCTGATTT AGTCGTCATT GGCAATGCAA TGAAACGTGG TAATCCTTGC
GTAGAGTATG TGTTGGAAAA TAGCTTACCT TATCGTTCAG GTCCACAATG GTTACACGAG
CATTTATTAC GTGATCGCTG GGTGCTTGCC GTATCGGGAA CACACGGCAA AACAACAACA
ACCGGTATGT TAAGTTGGAT TTTAGAACAA AATGGCTTGC AACCGGGGTT CTTAATAGGT
GGAATAGCCG GCAATTTCGG TGTTTCAGCA CGCTTAGGCA AGAGTCCATT TTTTGTTATA
GAAGCTGACG AATACGATAC GGCATTTTTT GATAAACGTT CAAAATTTGT ACATTACAAT
CCAAAAACGC TTATTATCAA TAACTTAGGG TTTGATCATG CAGATATTTT TGACAACCTA
CAAGCGATTC AACGCCAGTT TCACCATATG ATTAGAACAA TGCCTAAGAG CGGTCGTATT
CTTGCCTTTG CTCATGAACA ATCTGTAAAA GAAACTCTAG ACATGGGTTG CTGGTCTGAA
ATGCATTTTT TGGGACAAGA TCAGGAATGG CATACGGAAA GAATAGCTCA TGACAGTTCG
CATTTTGCTG TTTATCATCA GGGAAAAAAA GCCGGTGAAG TGCAATGGAA TATCGTCGGT
CAACATAATA TGAATAATGC ACTTATGGCG ATTGCGGCAG CTTACCATGT GGGCGTGCAA
GTCAAAGATG CTTGTCAAGC ACTATATTCT TTTGTCAATG CGAAACGTCG TTTGGAAGTA
AAAGGTGAAG TAAATGGAGT TACTGTTTAT GACGACTTTG CCCATCATCC GGCAGAAATT
CTTGCAACAT TAACCGCACT TCGAGACAAG GTCGGTGGCG GAGCACGTAT TTTGGCAGTG
CTAGAACCTC GATCAAATAC GATGAAAATG GGAATTCATA AAGATGAAAT AGCACCGGCA
TTGGCAAGAG CGGATTATGT TTTTTTATTG CAACCGGAAA ATATTCCTTG GAATGTAGTT
GAAATTGCTA ATGATTGTGT GCAACCGGCA AAATGGTCTG GAAATCTGGA CAACTTAGTT
GATTTAATTG TTACTGAGGC ACAACCTGAA GATCATATTT TGGTCATGTC AAATGGTAGT
TTTGGGGGAA TTCATCAGAA ATTACTGGAA AAATTACAGC TAAAAAATTC ATTATAG
 
Protein sequence
MNNKHLHILG ICGTFMGGVA IIAKQMGYKI TGSDTNIYPP MSTFLQQNGI EIIPHFDVSQ 
LQPAPDLVVI GNAMKRGNPC VEYVLENSLP YRSGPQWLHE HLLRDRWVLA VSGTHGKTTT
TGMLSWILEQ NGLQPGFLIG GIAGNFGVSA RLGKSPFFVI EADEYDTAFF DKRSKFVHYN
PKTLIINNLG FDHADIFDNL QAIQRQFHHM IRTMPKSGRI LAFAHEQSVK ETLDMGCWSE
MHFLGQDQEW HTERIAHDSS HFAVYHQGKK AGEVQWNIVG QHNMNNALMA IAAAYHVGVQ
VKDACQALYS FVNAKRRLEV KGEVNGVTVY DDFAHHPAEI LATLTALRDK VGGGARILAV
LEPRSNTMKM GIHKDEIAPA LARADYVFLL QPENIPWNVV EIANDCVQPA KWSGNLDNLV
DLIVTEAQPE DHILVMSNGS FGGIHQKLLE KLQLKNSL