Gene HS_1240 details

Gene Information

• Locus tag: HS_1240
• Symbol: rnc
• ID: 4240751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1420157
• End bp: 1420840
• Gene Length: 684 bp
• Protein Length: 227 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638104813
• Product: ribonuclease III
• Protein accession: YP_719452
• Protein GI: 113461383
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAAAA TTATGCAACT GGAAAAATTA CAAAAAAAAT TAGGTCACCA ATTTACTAAT 
CTTGATTATC TTAAACAAGC ATTAACGCAT CGAAGTGCTG CTGCATTTAA TAATGAACGT 
TTGGAATTTC TAGGTGATTC CATTCTAAAT TTTGCTATTG GCAAAGCACT TTACGAAAAA 
TTTCCTAAGT CTAATGAAGG TGAATTAAGC CGGATGCGTG CAACGTTGGT TAAAGAACAA 
ACTTTAGCTG TTGTGGCTCG CCAAGTTGAA TTGGGTGATT ACTTAAAACT AGGTGCCGGA 
GAGTTAAAGA GCGGTGGATT TCGCCGAGAA TCTATTCTAT CTGATTGTGT TGAAGCGTTA 
ATTGCAGCGA TTTATTTAGA TGCAGGAATC GATGTTGCTT TAGCTCGAGT TTATCAGTGG 
TATCAGGAAT TACTTGAACA AATAAAACCA GGAGAGGCAC AAAAAGATCC CAAAACACGC 
CTGCAAGAGT TTTTGCAAGG GCATCGCTTA AAACTTCCTG AATATGAAGT GATAGAAATT 
AAGGGAGATG CTCACAATCA GTCTTTTAGA GTGAGCTGTA AAGTGGAAAC ACTTACTGAC 
GTCGTTTTTG GGCAAGGGAC TAGTCGCCGT AAAGCGGAAC AACATGCTGC TCAACAAGCT 
ATTGAAAAAC TGAAAATTAA ATAA 

 

Protein sequence

MKKIMQLEKL QKKLGHQFTN LDYLKQALTH RSAAAFNNER LEFLGDSILN FAIGKALYEK 
FPKSNEGELS RMRATLVKEQ TLAVVARQVE LGDYLKLGAG ELKSGGFRRE SILSDCVEAL 
IAAIYLDAGI DVALARVYQW YQELLEQIKP GEAQKDPKTR LQEFLQGHRL KLPEYEVIEI 
KGDAHNQSFR VSCKVETLTD VVFGQGTSRR KAEQHAAQQA IEKLKIK