Gene HS_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1238 
SymbolgmhA 
ID4240749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1418590 
End bp1419171 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content37% 
IMG OID638104811 
Productphosphoheptose isomerase 
Protein accessionYP_719450 
Protein GI113461381 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAAG TGAAAACTGA GTTATTTGAA GCACAAGATG TACTAAATAA ATTTATCAGT 
AACGAACAAA ATATCAAGCT CATTCAACAA GCCGCATTAC TGATTTCGGA TAGTTTTAAA
CAACACGGTA AGGTATTATC TTGTGGTAAT GGTGGTTCAC ATTGTGATGC AATGCATTTT
GCAGAGGAAC TAACGGGACG TTATCGTGAA AATCGTCCGG GGTATCCGGC GATAGCAATC
TCAGATGTTA GCCATTTAAG CTGTGTAAGC AATGATTTTG GCTATGAACA TGTATTTTCT
CGTTATGTAG AGGCTGTTGG GCAAAAGGGC GATGTATTAT TAGGCATATC AACCTCAGGT
AACTCAAAAA ATGTATTAAA TGCTATTGAA GCGGCAAAAG CCAAAGGTAT GAAAGTGATT
GCCCTGACGG GGAAAGATGG TGGAAAAATG GCGGGACTTG CGGATGTGGA AATTCGTGTA
CCTCATTTCC GTTTTGCAGA TCGTATTCAA GAAATTCATA TTAAAGTTAT TCATATTCTA
ATCATGTTAA TTGAATTTGA GATGGCTAAA ATTAGACAGT AA
 
Protein sequence
MEQVKTELFE AQDVLNKFIS NEQNIKLIQQ AALLISDSFK QHGKVLSCGN GGSHCDAMHF 
AEELTGRYRE NRPGYPAIAI SDVSHLSCVS NDFGYEHVFS RYVEAVGQKG DVLLGISTSG
NSKNVLNAIE AAKAKGMKVI ALTGKDGGKM AGLADVEIRV PHFRFADRIQ EIHIKVIHIL
IMLIEFEMAK IRQ