| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1225 |
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| Symbol | ycdH |
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| ID | 4240728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1385764 |
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| End bp | 1386207 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638104790 |
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| Product | flavin:NADH reductase |
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| Protein accession | YP_719437 |
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| Protein GI | 113461368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00730125 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAAC TTGCCTCAGC AGTTCATATT GTGACCACAA GTGGTGAAAC AGGGCAGCAT
GGTTTTACAG CATCAGCCGT TTGTAGCGTG ACTGACTCCC CACCTACCTT GCTTGTTTGT
ATAAATAGCA ATGCACGTGC CTATGAGCAT TTTGTAAAAA ATCGGGTACT GATGGTTAAT
ACTTTGACAG CCGAACAATC TTCTTTATCA AATATATTCG CCTCACCATT AAGTCAAGAA
GAACGTTTTT CCAACGCTTC TTGGACAACG TTGACTACAG GATCACCGAT GTTACAGGAT
GCTCTGATTA ATTTTGATTG CGAAATTACA GAAATTAAGC ACGTTGGCAC TCACGATATT
TTAATTTGTA AAATTGTAGA TATACACCAA AGTAATGCAA AAAATGCTTT GGTCTATCGA
AATCGAGTTT ATCATTCGGT TTAA
|
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| Protein sequence | MAQLASAVHI VTTSGETGQH GFTASAVCSV TDSPPTLLVC INSNARAYEH FVKNRVLMVN
TLTAEQSSLS NIFASPLSQE ERFSNASWTT LTTGSPMLQD ALINFDCEIT EIKHVGTHDI
LICKIVDIHQ SNAKNALVYR NRVYHSV
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