Gene HS_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1212 
SymbolthrC 
ID4240713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1368815 
End bp1370092 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content39% 
IMG OID638104775 
Productthreonine synthase 
Protein accessionYP_719424 
Protein GI113461355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.13484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT ATAATATTAA ACATCCGGAA CAACAAGTAA GTTTTTCACA AGCTGTGCGT 
CAAGGTTTAG GAAAAGATCA GGGCTTATTT TTTCCTGAAA AATTACCGCA CTTTGACGAC
ATTGATAGCC TTTTATCTTT GCCTTTGGTT GAACGCAGTC AAAAGATTTT AACTGCTTTA
ATTGGTGCGG AATTGTCACA AGAAACTATT AGTGCAATGG TAAAAAATGC CTTTACATTT
CCGGCACCGA TGGTCAAAGT AGAAGATAAT ATCTATGCCT TAGAATTATT CCACGGTCCC
ACGTTAGCTT TTAAAGACTT TGGAGGACGT TTTATGGCAC AAGCCTTAGC AGCTGTGCGT
GGAGACAGTA AAATTACTAT TTTAACTGCT ACTTCAGGCG ATACCGGTGC TGCGGTTGCA
CATGCTTTCT ATGGCTTAGA AAATATTGAG GTAGTGATTT TATATCCAAA AGGTAAAATA
AGTCCGTTAC AAGAAAAATT ATTTTGTACA CTTGGCGGGA ATATTCGAAC TGTTGCGATC
AACGGTGATT TTGATGCTTG TCAAGCATTG GTGAAACAAG CCTTTGATGA TGAAGAACTT
CGTCAAGCTG TTGGTTTAAA CTCTGCGAAT TCGATTAATA TCAGTCGCTT GTTGGCACAA
GTTTGTTATT ATTTTGAGGC GGTTGCACAG TTACCGAAAG AAATTCGTCA AGACATTGTT
ATTTCTGTGC CGAGCGGTAA TTTCGGTAAC TTAACAGCGG GATTAATTGC CAAAACCTTA
GGCTTACCAA TCAAACGCTT TATTGCGGCA ACTAATGCCA ATGATACCGT TCCTCGCTAT
TTGAATAGCG GAAAATGGCA GCCTCATACA ACGGTTGCGA CTCTTTCCAA TGCAATGGAT
GTGAGCCAAC CGAATAACTG GCCTCGTGTA GAAGAATTAT TTAAATGTAA CGGCTGGTCT
TTAAGTGAAT TGGGTTCAGG TGCATTGAGT GATGAAGAAA CAGAAAAAAC CTTGCAGGCA
CAATATGCCA AAGGCTATTT ATGCGAACCA CATGGGGCTA TTGCGTATCA GGTGCTAAAA
GATCAATTAC AGGTTAATGA AACGGGTATT TTCCTTTGCA CGGCACATCC AGCAAAATTC
AAGGAAAACG TTGAGCGTAT TTTAAGTCTC GAGCTTGTGC TTCCGGAAAC ATTGGATAGG
TACAACAAGT TGCCATTGCT TTCTGATGAA ATGGAAAATG ACTTCGCTCA ATTACGTGCT
TATTTATTAA AAAAATAA
 
Protein sequence
MNLYNIKHPE QQVSFSQAVR QGLGKDQGLF FPEKLPHFDD IDSLLSLPLV ERSQKILTAL 
IGAELSQETI SAMVKNAFTF PAPMVKVEDN IYALELFHGP TLAFKDFGGR FMAQALAAVR
GDSKITILTA TSGDTGAAVA HAFYGLENIE VVILYPKGKI SPLQEKLFCT LGGNIRTVAI
NGDFDACQAL VKQAFDDEEL RQAVGLNSAN SINISRLLAQ VCYYFEAVAQ LPKEIRQDIV
ISVPSGNFGN LTAGLIAKTL GLPIKRFIAA TNANDTVPRY LNSGKWQPHT TVATLSNAMD
VSQPNNWPRV EELFKCNGWS LSELGSGALS DEETEKTLQA QYAKGYLCEP HGAIAYQVLK
DQLQVNETGI FLCTAHPAKF KENVERILSL ELVLPETLDR YNKLPLLSDE MENDFAQLRA
YLLKK