| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1206 |
|---|
| Symbol | |
|---|
| ID | 4240707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1361027 |
|---|
| End bp | 1364323 |
|---|
| Gene Length | 3297 bp |
|---|
| Protein Length | 1098 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638104769 |
|---|
| Product | potassium efflux protein KefA |
|---|
| Protein accession | YP_719418 |
|---|
| Protein GI | 113461349 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGA TAAAAAATAA ATTCAAACAA GTTGCCATGA TTGGCTTATT CTCTTTAGCT
CAGTTTGCAC TGGCAGGAGC AATTTTGACC GAAAATGATG TAAAGATGCG ACTTGATGAG
ATTAAAAAAA TCGAACACCC CCAGCAAGAA GATAAAAGTG CGGTGCAAAA CTTGGAAGAA
ACATTGTTTC TCTTAGGAAA AATAGCAAAA CAGAAAGAAG ACAATCTAAA GTTACAAAAA
CTGATTCAAG ATGCACCAAA TGAGCAAAAG AACATCAGAG AGGAAATCAC TACATTAAAA
GAGGCGTTTG TTGTTCGTGA TTTTGATAAT TTGTCCATCG AGCAATTAGA GGATAACTTA
GCAAAAATAC AATCCGAATT ACAACAAGTT CAAGCTGATT TAGTACAAGC TAATGCACAG
TTAGTTAATC AACATTCTGC AACAGAGCGA GCACAAAGTG CGTTAAGTGC CAATATTGTT
CGTACACAAG AAATTGATAA ATTGTCTTTT AGTGTTGATA TTGTACCTGA GGAGCAAAAT
AAATTAGCTA CAGAAAGTGC GTTAATTGAA TTACAAAATG ACTACAATCA AACTGTATTA
CAAGGGAATA ATGAACTCAC TGCACTTTAT ACTTTGCAAT TGGAATTGAA AAATCTTGTA
CAACAGCATT TACAAGCTAC GCAAACTGCG TTACAGACGG AAATTAATCG ACGTAAATTA
GTGCAAACTG AGCAACATGT GGAGCAACTA AAACAGATTC AAAAGGAAGC AGAGGGTAAT
CCGTTATTAG TTCAGCAACA ACAAATTAAT ATTCAGATTG GACAAGATTT AGTGGAACAA
ACAACTAAGC TGAACGCTTT GTCGCAAGAC AATTTGCGTA TTAAATCTGT TTTGGATAAT
TTGCAACAAA CTGAACGTAA TATTAATGAA CAAATTAGTG CTTTACAGGG AACTTTAGTT
TTATCTCGAA TTATTAATAA GCAAAAGCAA TTATTACCGC ACGATAGGAT GATTACAGGA
TTATCAAATC AAATTGCCGA TTTACGTGTG AAAATTTTCG ATTTAACGGA GTTAAGAGAT
AGCCTTTATG ATATTGACGG TTATATTTCC AATATAGAAA GAAAGCAAGG GGTTACTTTT
GGAATAGCTG AACACGCACA GCTCACCAAA ATTTTACGGG AGCGTCAGAA GGGTATTTCT
GATTTGGTGT CTATTTTAAA TGATCAACTC AATCTTTCAA TCAATATTGA ATTAAATCAA
AAACAAGTCA ATTTAATTAG TGATACTTTA CAAGAAAAAC TCCAACAACA AAGTTTCTGG
GTTAAGAGTA ATACACCTAT TGATTTGGAT TGGGTTAAGC ATTTTCCTTC ACTACTAAAA
ATAGAATTGG AGGATATTCG TACGCAATTT AATTTCAACA ATTGGCAAGA TAATATTATT
TCTGCCACTG CGTTAATTGT TTTCCTTTTA TCCATCGCCT TTTTTATTTC TTGGCGTAAA
GAAAAAATTA AGCAACGGTT GAATTATATT AATAGCAAAA TTAATACGTT ACAGGAAGAT
AGACAGCTTT ACACTCCGGA AGCTGTTTTT TGGACGATTA TTCTTTGTTT ACCGATGACG
TTAGTTGTCT TAGTCGGTTT AATTGTTATT ACTTTTATTT GTTTTAATGA TCCTGAAAAA
TTCTGGTTGT GGTCAGTAAG AATGTCGGGT TATTGGTGGC TTTTCGCTTT TATGTTAGCG
ATGTTACGTC CAAATGGCCT TGCTTATCGT CATTTTAGTA TGCCTAAACA TAATGTAGAG
CTTTTTTCCA ATGTGATGAA ACGATCAGTA TGGATTACTG TTCTTTGGCT TAATGCCTCT
ATGTTTACTT ATTTAGATGG AGGAATTGCT AATGATGTGA TTGGTCAATT GATGACAATT
GCGGTCTTAG TTATTTCACT GTTTATTATT GGACCTCGTA TGCGTTATGC AGTCCAAGCT
TATGAAAAAA ACTCAGAAAA AAAACCTTTC CTAAAAGTTT TCCGTATTGT GTTGCTACTC
TCTCCTATTA TTCTCATTGT GTTGGTAGTT TTAGGTTATT ACTACACTAC GTTAAATTTG
ATGGATCATT TGATGTCTTC TTATTTTGCT TTGATGATAT GGATAGTAAT TCGCAATATA
GTGTATAGAG GATTTACTAT TTCTGCTCGT CGTTTAGCTT ATCGTCGTTT GCAAGAAAAA
CAAAAGAAAA CACAGGTACA ATCTCAAGAT GTGGTGGATA AAGAAGAGTT TAACCTTAAT
ACACAAGAGG AAGTTTTAGC AATTTCAGCC GTTAAGGATC AAGTTTTGCG AGTGATGGAT
TTAGTTTTAC TCGTCGGCTT AATCGGTATG TTCTATTGGG TTTGGTCTGA TTTAATTACG
GTAGCTTATT ATTTGGAAGG CGTAACGTTA TGGAAACAAA CTGCCATAAC AGAAGTTGGT
ACAGTTATTG AAACTATTAC CCTGTGGAAT TTGTTATTAG CACTGATTAT TTTAGGCATC
ACGTATGCTT TAGTGCGAAA TATTGGTGGG GTATTGGAAG TATTAATTTT TTCAAGAGTT
AATTTTTCAC AAGGAACACC TTACACCATA ACAACTTTAC TGATTTATTT TATCATTGCA
ATCGGTAGTG CTATGGCATT CTCTACTTTG GGTATGTCAT GGTCAAAATT ACAATGGTTA
TTTGCCGCAC TTTCTGTTGG TTTAGGTTTT GGTTTGCAGG AGATCTTTGC TAACTTTGTA
TCAGGTATCA TTATTTTATT TGAACGTCCT GTTCGGATTG GTGATTTTGT AACAATTGAC
AATTTTTCAG GAACTGTGTC AAAAATTAGA ATTCGTTCCA CAACAATTAT CGATTCTGAT
AAGAAAGAAG TTATTGTACC CAATAAAGCC TTTGTAACAG AGCGAATTGT GAATTGGGCA
TTGACCAATT CTATGACTCG TGTTGTGATT GGTGTCGGTG TGGCTTACGG TTCAGATTTA
GAATTGGTTC GTAAGTTGTT GTTGCAGGCA GCGTATGAAA CACCTACGGT TTTAAAAGAA
CCGGAACCGT CTGCTTATTT TATAGCGTTT GGTGCAAGTA CATTAGATCA CGAATTGCGG
GTTTATGTGG GTAAATTGTC AGATCGTATG ACTACACAAG ACTTTTTAAA TCGTCGTATT
AATGAACTAT TTGCACAACA TAACATTGAA ATTGCATTTA ATCAGTTGGA TGTATTTATT
AAAAATCAAA CAACAAATGA AGAAGTAAAA GTACTTTCAG AGAATTTACA AAGATAA
|
|---|
| Protein sequence | MKKIKNKFKQ VAMIGLFSLA QFALAGAILT ENDVKMRLDE IKKIEHPQQE DKSAVQNLEE
TLFLLGKIAK QKEDNLKLQK LIQDAPNEQK NIREEITTLK EAFVVRDFDN LSIEQLEDNL
AKIQSELQQV QADLVQANAQ LVNQHSATER AQSALSANIV RTQEIDKLSF SVDIVPEEQN
KLATESALIE LQNDYNQTVL QGNNELTALY TLQLELKNLV QQHLQATQTA LQTEINRRKL
VQTEQHVEQL KQIQKEAEGN PLLVQQQQIN IQIGQDLVEQ TTKLNALSQD NLRIKSVLDN
LQQTERNINE QISALQGTLV LSRIINKQKQ LLPHDRMITG LSNQIADLRV KIFDLTELRD
SLYDIDGYIS NIERKQGVTF GIAEHAQLTK ILRERQKGIS DLVSILNDQL NLSINIELNQ
KQVNLISDTL QEKLQQQSFW VKSNTPIDLD WVKHFPSLLK IELEDIRTQF NFNNWQDNII
SATALIVFLL SIAFFISWRK EKIKQRLNYI NSKINTLQED RQLYTPEAVF WTIILCLPMT
LVVLVGLIVI TFICFNDPEK FWLWSVRMSG YWWLFAFMLA MLRPNGLAYR HFSMPKHNVE
LFSNVMKRSV WITVLWLNAS MFTYLDGGIA NDVIGQLMTI AVLVISLFII GPRMRYAVQA
YEKNSEKKPF LKVFRIVLLL SPIILIVLVV LGYYYTTLNL MDHLMSSYFA LMIWIVIRNI
VYRGFTISAR RLAYRRLQEK QKKTQVQSQD VVDKEEFNLN TQEEVLAISA VKDQVLRVMD
LVLLVGLIGM FYWVWSDLIT VAYYLEGVTL WKQTAITEVG TVIETITLWN LLLALIILGI
TYALVRNIGG VLEVLIFSRV NFSQGTPYTI TTLLIYFIIA IGSAMAFSTL GMSWSKLQWL
FAALSVGLGF GLQEIFANFV SGIIILFERP VRIGDFVTID NFSGTVSKIR IRSTTIIDSD
KKEVIVPNKA FVTERIVNWA LTNSMTRVVI GVGVAYGSDL ELVRKLLLQA AYETPTVLKE
PEPSAYFIAF GASTLDHELR VYVGKLSDRM TTQDFLNRRI NELFAQHNIE IAFNQLDVFI
KNQTTNEEVK VLSENLQR
|
|---|
| |