Gene HS_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1205 
SymbolaroC 
ID4240706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1359929 
End bp1361011 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content43% 
IMG OID638104768 
Productchorismate synthase 
Protein accessionYP_719417 
Protein GI113461348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0521105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGAA ATAGTATTGG GCAACTTTTC AGGGTAACGA CATTTGGAGA ATCCCATGGT 
ATTGCGTTGG GCTGCATTGT AGACGGTATG CCGCCCGGAC TTGCTTTATC CGAAGATGAT
ATTCAGCCGG ATTTGGATCG TCGTAAACCG GGAACTTCAA AATATACTAC GCCACGCCGT
GAAGAGGATA AAGTACAAAT TTTGTCCGGT GTGTTTGACG GAAAAACCAC AGGAACAAGT
ATCGGTATGA TAATTAAAAA TACCGACCAA CGTTCGCAAG ACTATGGTGA AATAAAAGAT
CGTTTTCGTC CGGGGCATGC TGATTTTACT TACCAGCAAA AATATGGTTT ACGTGATTAC
CGTGGCGGAG GGCGATCTTC TGCACGTGAA ACAGTGATGC GTGTAGCAGC GGGGGCAATT
GCTAAAAAAT ATTTGCGTGA GTATTTTGGT ATTGAAGTAC GAGGTTATTT ATCACAAATC
GGTGAGATAA AAATTGATCC GCAAGTGGTA GCCGATGTGA GTAAAATTGA TTGGGCGAAA
GTAAATAGCA ATCCATTTTT TTGTCCCGAT GAAAGTGCGG TGGAAAAATT TGATGAATTG
ATTCGAGAAT TGAAAAAGGC AGGAAATTCT ATTGGGGCGA AATTAACCAT TGTTGCTGAA
CATGTGCCTG TCGGTTTAGG CGAGCCTGTT TTTGATCGTT TAGATGCGGA TTTAGCTCAT
GCTCTCATGG GAATTAATGC GGTAAAGGCG GTAGAAATTG GTGACGGTTT TGCAGTTGTT
GAACAAAAAG GAACGGAACA TCGTGATGAA ATGACACCGG AGGGGTTTTG TTCCAACCAT
GCCGGCGGTA TTTTGGGCGG GATTAGCTCT GGGCAACCGA TTATCGCTAC CATTGCGTTA
AAGCCTACTT CGAGTATTAC TGTTGTAGGG CGTTCAGTGA ATTTAAATAA TGAGCCTGTT
GACGTGATTA CTAAGGGACG GCATGATCCT TGTGTGGGAA TAAGAGCTGT TCCAATTGCT
GAGGCGATGA TGGCTATTGT TTTATTGGAT CATTTATTAC GCTTTAAAGC ACAATGTAAA
TAG
 
Protein sequence
MAGNSIGQLF RVTTFGESHG IALGCIVDGM PPGLALSEDD IQPDLDRRKP GTSKYTTPRR 
EEDKVQILSG VFDGKTTGTS IGMIIKNTDQ RSQDYGEIKD RFRPGHADFT YQQKYGLRDY
RGGGRSSARE TVMRVAAGAI AKKYLREYFG IEVRGYLSQI GEIKIDPQVV ADVSKIDWAK
VNSNPFFCPD ESAVEKFDEL IRELKKAGNS IGAKLTIVAE HVPVGLGEPV FDRLDADLAH
ALMGINAVKA VEIGDGFAVV EQKGTEHRDE MTPEGFCSNH AGGILGGISS GQPIIATIAL
KPTSSITVVG RSVNLNNEPV DVITKGRHDP CVGIRAVPIA EAMMAIVLLD HLLRFKAQCK