Gene HS_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1202 
SymbolmsbB 
ID4240703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1357298 
End bp1358251 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content38% 
IMG OID638104765 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_719414 
Protein GI113461345 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA ATAATGATTT ACGTTTAACC GCACGGGTCG GATATCAACC TCATTACTCT 
TGGTCCTATT TATTGCCTAA ATATTGGGGT ATTTGGCTCG GTATTTTTGC TTTAGTAATT
TTAGCTTTTG TTCCTTTTCG CTGGCGAGAT AAATTGGCGA CAAAATTGGG CAGAATTATC
GCTCGTAAAG CGAAGAAACA GAGACATCGT GCTGATGTCA ATTTGCGTTA TTGTTTTCCG
CATTGGTCAG AAAAACAGCG TAATGAAGTG ATTGAAAATA TGTTTATTAC TGTTACTCAA
GTGATGCTTG GGATTGGTGA AATTGCATTA CGTTCAAAAA AACACCTGAA AAAACGTAGT
GAGTTTAAAG GGTTAGAGCA TGTTCAGAAG GCAAGAGCGG TAGGAAAAAA TATTATTTTA
ATGGTGCCAC ATGGTTGGGC AATTGATGCG TCGGGGATCA TTTTACATGC ACAAGGAATA
GCGATGACTT CTATGTATAA CCCACATCAA AACCCTCTTG TGGATTGGTT ATGGACGATG
ACTCGTCAGC GGTTCGGTGG AAAAATGCAT GCTCGTCAAA ATGGAATTAA GCCTTTTCTT
AATCATGTAA AGAAAGGTGA AATGGGCTAC TATTTACCTG ATGAAGATTA TGGTGAGGAA
TTGAGTGTTT ACGCTGATTT TTTTGCTACT TATAAAGCCA CTTTGCCGGG ATTAAATAAA
ATGGCAAGGT TGGCAAAAGC TGTTGTTATT CCGATGTTTC CACGTTATAA CGCACAACGT
GGGAAGTATG AAATAGAAAT TTGTGCACCT TTAGAATTAA CGGAAGATCC AGAACAATCG
GCGAGAATGA TGAATCAAGC AATCGAATAC TTTGTTACTC CAACACCGGA GCAATATGTC
TGGATTTTAC GCTTATTAAA AACCCGCAAA GATAATGAAG ATATTTATCG TTAG
 
Protein sequence
MTENNDLRLT ARVGYQPHYS WSYLLPKYWG IWLGIFALVI LAFVPFRWRD KLATKLGRII 
ARKAKKQRHR ADVNLRYCFP HWSEKQRNEV IENMFITVTQ VMLGIGEIAL RSKKHLKKRS
EFKGLEHVQK ARAVGKNIIL MVPHGWAIDA SGIILHAQGI AMTSMYNPHQ NPLVDWLWTM
TRQRFGGKMH ARQNGIKPFL NHVKKGEMGY YLPDEDYGEE LSVYADFFAT YKATLPGLNK
MARLAKAVVI PMFPRYNAQR GKYEIEICAP LELTEDPEQS ARMMNQAIEY FVTPTPEQYV
WILRLLKTRK DNEDIYR