Gene HS_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1188 
SymbolradA 
ID4240689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1340256 
End bp1341632 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content43% 
IMG OID638104751 
ProductDNA repair protein RadA 
Protein accessionYP_719400 
Protein GI113461331 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAT CACCCAAAAC AGCCTACGTG TGTAATGACT GCGGTGCGGA GTTTGCCCGT 
TGGCAAGGAC AGTGTTCTGC ATGTAAAGCA TGGAATACGA TTAGCGAAGT GCGGTTAGTT
TCTACAGCAA AAGTGAAAAA TGATCGTTTT AGCGGATATG CAGGAGAAAC GAAAGCCAAA
ATTCAAACTT TAGCTGAAAT CAGTTTGCAA GAAACGCCTC GTTTTACCAG TGGTTTTAGA
GAATTAGATC GTGTATTGGG GGGCGGAATT GTGCCGGGTA GTGCGATTTT AATCGGTGGG
CATCCCGGTG CAGGAAAAAG TACCCTACTG TTACAAGTGA TGTGCGGACT TGCTCAAAGT
ATGACCGCAC TTTATATCAC GGGCGAAGAA AGCCTTCAAC AAGTTGCTAT GCGAGCTAAT
CGTTTAGGAT TGCCAACGGA TCGTTTGCAA CTCCTATCTG AAACCTCAAT TGAACAAATT
TGTCATCTTG CTGATCAACT AAAGCCGCAA ATTATCGTTA TTGACTCTAT TCAGGTAATG
CATTTATCTG ATATTCAATC TTCCCCCGGA AGTGTAGCTC AAGTGCGTGA ATGTGCGGCA
TTTTTGACCC GTTATGCTAA GACAAGGCAA GTTGCCATTA TCATGGTCGG TCATGTAACG
AAAGACGGAA CGTTGGCAGG GCCAAAGGTA TTAGAACATG CAATTGATGC ATCTTTATTG
TTAGAAGGTG AATCCGATTC ACGCTATCGC ACTTTGCGTA GTCATAAGAA TCGTTTTGGT
GCGGTGAATG AATTGGGTGT TTTTGCGATG ACAGAGCAAG GTTTGAGAGA GGTTAAAAAT
CCTTCTGCGA TTTTTTTAAG TCGTGGTGAT GAACAAACGT CAGGAAGTTC CGTGATGGTA
GTATGGGAAG GAACTCGTCC TTTATTAGTT GAAATTCAAG CACTTGTTGA TCATTCCATG
TTAGCCAATC CAAGACGTGT TGTAGTAGGT TTAGAGCATA ATCGATTAGC ATTGCTTTTA
GCGGTATTAC ATCGTCATGG CGGTTTACAA ATGTCCGATC AAGATATTTT TGTTAATGTT
GTTGGCGGGG TAAAAGTAAC GGAAACCAGT GCCGATCTTG CCTTATTGCT GGCATTAATT
TCCAGCTTTC GTAATCGACC TTTGCCACAA GATTTAGTCG TGTTCGGCGA GGTAGGTTTA
GCGGGGGAAA TTCGCCCTGT ACCAAGTGGA CAGGAACGTA TTAGTGAAGC AGCAAAGCAC
GGTTTTAAGC GAGCTATTGT TCCCTTTGCA AATAAACCGA AAAGTGCGGT CGAAAATATG
CAAGTTTTTA CAGTCAAGAA ATTAGCGGAT GCGTTGGCGA TATTAGATAA TTTTTAA
 
Protein sequence
MAKSPKTAYV CNDCGAEFAR WQGQCSACKA WNTISEVRLV STAKVKNDRF SGYAGETKAK 
IQTLAEISLQ ETPRFTSGFR ELDRVLGGGI VPGSAILIGG HPGAGKSTLL LQVMCGLAQS
MTALYITGEE SLQQVAMRAN RLGLPTDRLQ LLSETSIEQI CHLADQLKPQ IIVIDSIQVM
HLSDIQSSPG SVAQVRECAA FLTRYAKTRQ VAIIMVGHVT KDGTLAGPKV LEHAIDASLL
LEGESDSRYR TLRSHKNRFG AVNELGVFAM TEQGLREVKN PSAIFLSRGD EQTSGSSVMV
VWEGTRPLLV EIQALVDHSM LANPRRVVVG LEHNRLALLL AVLHRHGGLQ MSDQDIFVNV
VGGVKVTETS ADLALLLALI SSFRNRPLPQ DLVVFGEVGL AGEIRPVPSG QERISEAAKH
GFKRAIVPFA NKPKSAVENM QVFTVKKLAD ALAILDNF