Gene HS_1183 details

Gene Information

• Locus tag: HS_1183
• ID: 4240684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1333477
• End bp: 1334175
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638104746
• Product: permease
• Protein accession: YP_719395
• Protein GI: 113461326

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.103097
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAA CTACTCAATT GATGAATATG GTCGATATGT TGATCGTTAC AGTGATCTTT 
TTTGGCATGC CGATTTATAC TTCTCTGTCG CAATTTTTCT TATTGCAAGA AGGTGCGGTC 
GCAATTACAG ACACGTTGAC ATTTACGGAT CAGGATAATA TTTGGGCAAT TTTGATAGAA 
CTTATCTCAT TAGCGATTGC TGCGGTGTAT TTAAAGCTAA GACGCTTTGA TTTTATGCAG 
CTTACCTTTT CTTTTAACGC TAAAGCGATT GTCCTGACCG CAGGGATAAT TTTGATTGCC 
GGCAGTCTCA GCGAACTTTA TTTCTATTTG GCAGCTCCCT TTCAAGATGC CGGTGCATAT 
CTTACCTCGG CTGAGGTTGC ACCTACAGAT ACAACATCGA CCTTATCTTT TTACCTAGTC 
CTCTTTTCAT TGCTCAACGG TTTTTTTGAA GAAGTCTTTT TTCTCGGCTT GATATTTGCA 
GTGAATAAAA AAGCCTTGCC TTATGCGATT GTGTTCAGCT TAGTCATCCG TTTTTTGTTT 
CATACCTATC AAGGTATGTT TTATGCAGTA AACGTATTGT TATTCGGTAT CGTATTGCTA 
ATACTTCGCT CTAAAATCAA AAATTTATTA CCGTTTACGT TAGCACATGC GTTCTTTGAT 
GTATTTGGAT TGGGGTTGTT TTTTATTGAA TATTTTTAA 

 

Protein sequence

MKQTTQLMNM VDMLIVTVIF FGMPIYTSLS QFFLLQEGAV AITDTLTFTD QDNIWAILIE 
LISLAIAAVY LKLRRFDFMQ LTFSFNAKAI VLTAGIILIA GSLSELYFYL AAPFQDAGAY 
LTSAEVAPTD TTSTLSFYLV LFSLLNGFFE EVFFLGLIFA VNKKALPYAI VFSLVIRFLF 
HTYQGMFYAV NVLLFGIVLL ILRSKIKNLL PFTLAHAFFD VFGLGLFFIE YF