Gene HS_1177 details

Gene Information

• Locus tag: HS_1177
• Symbol: ptsN
• ID: 4240678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1327175
• End bp: 1327735
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638104740
• Product: nitrogen regulatory IIA protein
• Protein accession: YP_719389
• Protein GI: 113461320
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTAAAT TTACTGAATT ACTCTCTCCT GAAAATATCC GTCAAGGGTT AACTTGTACA 
AGCAAAAAAA GAGCTTTTGA AATCATATCC AGCTTAATTG CTAAACAACT TTCAGAACAA 
ATTGATGGCT TAGAAGCAGA TGAAGTTAGT CTTCAGGAAA AAGAAACTCT TTGTACCGAT 
TCTTTACTCA ACCGAGAAAA ATTAGGCAAT TCCAGTTTGG GAAACGGTAT GGCTATGCCT 
AAAGGAAGAT TACCCCTAGG TAATACACCT ATCGCAGTTT TCTTACAACT GAGTGCACCT 
TTAAAATATG ATGCACTTGA TCATCGTGAA GTCGATCTTA TTTTTGCCTT ATTATCCCCG 
ACAGAACATT GTTCCAATCT CGTTCAAGAA TTGCCCCATT TAGTAGAGCG TTTAAAAGAC 
AAATCTCTAA TTAAACAATT AAGAAACGCA CAAAGTGCGG AGGAAATTTG GCAAATTTTT 
CAATTTTCAG ATAGACAGGC GGAAACATTA CCAACTACTG AACAACACCA TGCTGAAACA 
AAATATCCCG AGGAAGAATA A 

 

Protein sequence

MLKFTELLSP ENIRQGLTCT SKKRAFEIIS SLIAKQLSEQ IDGLEADEVS LQEKETLCTD 
SLLNREKLGN SSLGNGMAMP KGRLPLGNTP IAVFLQLSAP LKYDALDHRE VDLIFALLSP 
TEHCSNLVQE LPHLVERLKD KSLIKQLRNA QSAEEIWQIF QFSDRQAETL PTTEQHHAET 
KYPEEE