Gene HS_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1171 
Symbol 
ID4240672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1323024 
End bp1323530 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content35% 
IMG OID638104734 
Producthypothetical protein 
Protein accessionYP_719383 
Protein GI113461314 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAA CAGTTAAACA CGAATTTTGG GTGGGATTAT TTTTATTAAT TGGTATTGGG 
GCATTGGTTT TTCTTGGATT AAGAGTTGCG AATATACAAG GGTTTAATCA AGCAAAATCT
TATCAAGTTT ATGCTGTTTT TGATAATATT GGCGGACTTA AAGTTAGAGC TCCTTTGAAA
GTCGGTGGTG TTGTAATAGG CAGAGTATCA TCAATTGAAC TTGATGATAA AACCTATTTA
CCGCTGGTTA AAATTGCTAT AGATGAAAAG TACAATGAAA TTCCGGATAA CAGTTCATTG
TCAATTAAAA CCTCAGGTTT GTTAGGTGAG CAGTATATTT CCCTTAGCGT TGGATTTGAT
GATGGTGAAA CTTCCATGTT AAAAGAGGGA AGTCGTATTG TAGATACTAA ATCAGCTATG
GTATTGGAGG ATCTTGTCGG GCAATTCTTA TATGGCAGCA AAGAGAATAA AAGTACTCAA
AAGCAATTGG AACCGGATGT TCAATAA
 
Protein sequence
MRQTVKHEFW VGLFLLIGIG ALVFLGLRVA NIQGFNQAKS YQVYAVFDNI GGLKVRAPLK 
VGGVVIGRVS SIELDDKTYL PLVKIAIDEK YNEIPDNSSL SIKTSGLLGE QYISLSVGFD
DGETSMLKEG SRIVDTKSAM VLEDLVGQFL YGSKENKSTQ KQLEPDVQ