Gene HS_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1170 
Symbol 
ID4240671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1322362 
End bp1322988 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content35% 
IMG OID638104733 
Producthypothetical protein 
Protein accessionYP_719382 
Protein GI113461313 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA AACTATTTTT TAAAATAATT GTGGCAATGA CCGCACTTTT TGCTGTACAA 
GCTATGGCGG AAGAAACACC TTATGAACTA ACGCTTGATG TATCTGAGCG TTTATTTAAA
GCCATTGATA CTAACCAAAG TAAGATTAAA CAAGATCCTA ATTATTTGCG TACTATCGTA
CGTCAAGGAC TCATGCCCTA TGCTCATGTA AATTATGCAG GATCTTTAGT GTTAGGGCCT
TATTTTAAAT CAACATCACC GGAACAACGT GCAAAATTCT TTGCGGTATT TGATAAATTT
ATCGAATATC AATATGCCAA AGCATTGACG CTTTATAGTA ATCAGAAAAT TAGTGTATTA
AAGCCGATTA ATGTAACGGC AGATCAAATG AATGTGCCGG TTAAAATACT GCAAAGCGGC
AATGTTGCAC CTATTGATTT AGAGTTTTAT TGGCGTAAGA ACAGTAAATC AGGTAAGTGG
CAAGTGTATG ATATGTCCGC TAACGGTGTG AGTACGGTTC ACTCAACAAG ACAGGAATGG
TTACCTATTT TACGCAAAAA AGGTATAGAA ACTTTGATTG ATGAGATGGA AGAATTTTCT
AAACAACCAA TTATTAGTAG TAAATAA
 
Protein sequence
MLKKLFFKII VAMTALFAVQ AMAEETPYEL TLDVSERLFK AIDTNQSKIK QDPNYLRTIV 
RQGLMPYAHV NYAGSLVLGP YFKSTSPEQR AKFFAVFDKF IEYQYAKALT LYSNQKISVL
KPINVTADQM NVPVKILQSG NVAPIDLEFY WRKNSKSGKW QVYDMSANGV STVHSTRQEW
LPILRKKGIE TLIDEMEEFS KQPIISSK