Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1158 |
Symbol | potB |
ID | 4240659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1308543 |
End bp | 1309403 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638104721 |
Product | spermidine/putrescine ABC transporter membrane protein |
Protein accession | YP_719370 |
Protein GI | 113461301 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000395482 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGA ACAGTAATAA ATTTCAAAAC TTAACTGTTA GTGTCATTTT CGGCTGGTTA CTCTTCTTTG TTTTAGTACC AAACCTGCTA GTCTTAACAG TTAGTTTTTT ATCAAAAGAT AGCAGTAATT TTTATGCTTT GCCTTTTAGC TTGGAAAGTT ACGCAAACTT AGTTGACTCA CATTACGCCA AAGTAATGTG GAATTCACTC CGTATGTCTG CGATTGCAAC TGTTATCTGT TTACTTGTAG GTTATCCTTT TGCATTTTTC ATTGCCAAAA TAAAACCCTC ATACCGTCCA TTTTTGCTAT TCCTCGTTGT TTTACCTTTT TGGACGAATT CGTTAATTCG TATTTACGGA ATGAAAATCT TTCTTGGTAT GAAAGGTATT TTAAACAATA CCCTAATTGC AATCGGTATT ATTGACACGC CAATTCGTAT CTTGAATACC GAAACTGCGG TAATCATTGG ATTAGTTTAC ATCTTACTGC CTTTTATGAT TTTACCGCTT TACGCTGCCA TTGAAAAACT GGATCTTCGT TTATTAGAAG CGGCAAAAGA TTTGGGAGCG AATTCATTCC AACGTTTTAT TAGAATCATT ATTCCATTAA CAATGCCGGG AATTATCGCA GGTTGTTTGT TAGTTCTATT ACCCGCAATG GGAATGTTCT ATGTGTCAGA TTTGCTTGGC GGTGCGAAAG CAGCCCTAGT AGGTAATGAA ATTTATGTCC AATTCTTAAA AATAAGAAAC TGGCCTATGG GTTCAGCAAT TAGTATAGCA CTTACTCTAC TAATGGCTTT ATTAATTTTT ATTTACTATA AAACAAGTAA ATTATTAAAT AAAAAAATGG AGTTGGAATA A
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Protein sequence | MKMNSNKFQN LTVSVIFGWL LFFVLVPNLL VLTVSFLSKD SSNFYALPFS LESYANLVDS HYAKVMWNSL RMSAIATVIC LLVGYPFAFF IAKIKPSYRP FLLFLVVLPF WTNSLIRIYG MKIFLGMKGI LNNTLIAIGI IDTPIRILNT ETAVIIGLVY ILLPFMILPL YAAIEKLDLR LLEAAKDLGA NSFQRFIRII IPLTMPGIIA GCLLVLLPAM GMFYVSDLLG GAKAALVGNE IYVQFLKIRN WPMGSAISIA LTLLMALLIF IYYKTSKLLN KKMELE
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