Gene HS_1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1132 
SymbolnagZ 
ID4240633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1271025 
End bp1272080 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content40% 
IMG OID638104695 
Productbeta-hexosaminidase 
Protein accessionYP_719344 
Protein GI113461275 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00323913 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAT TATTAATAGA TTTATCGAGT CAAGAGTTAC GTCAAGAAGA AATCGAATTA 
CTTGAACATC CTCTAGTCGC CGGGTTAATT TTATTTAGCC GCAATTTTTA TGATATTGAG
CAAATCCGAC ATCTCATTAG ATCTGTGCGT CAAAAGGTTA AAAAGCCTTT ATTAATTACT
GTTGATCAAG AGGGTGGGCG AGTACAGCGT TTTCGTCAGG GTTTTACGCA ATTACCGGCA
ATGCAGTCCT TTGCCTGTTT ACTTTCTGAT CCTCAAGAGC AACAGGAAAT GGCTTGGCGA
GCAGGTTGGC AAATGGCGGC GGAAATGACC GCACTTGATA TCGATCTTAG CTTTGCACCT
GTTTTGGATC TTGGGCATCA ATGTAAGGCA ATTGGCGACC GCAGTTTTCA TTATGAGGAA
AAGAAACTGA TTGAACTTGC TGAGAAATTT ATTCAAGGTA TGAGACAAAT CGGAATGTCG
GCAACGGGTA AGCATTTTCC CGGTCATGGA CATGTGTTAG CCGATTCTCA TTTGGAAACA
CCTTATGATG ATCGAGCAAA AGAATTAATT TTTGCACAAG ATATTCGACC GTTTCAGTCT
TTGATTAAAC AAGGGTTGTT AGATGCAGTG ATGCCGGCAC ATGTTATCTA CACTCAATGT
GATAATCAAC CAGCAAGTGG ATCGTCTTAT TGGCTAAAGG AGGTTTTACG TCAACAATTG
GGATTCCAAG GAGCGATTTT TTCTGATGAT TTGGGTATGA AAGGTGCCGG TTTTATGGGG
GATTTTGTTG CTCGTTGTAC GCAATCTCTT CAGGCGGGTT GTGATTTATT GTTGTTATGT
AACGAGCCTG AAGCAGTGGT GCAAGTTTTA GATCGTTTTA AACCACAGGA AAGTCAAAAT
AAACGAATAA TACGCCAAAC TAGATTGAAT AAATTATTCA AAAAACAACG GATTGATTGG
CAAACCTTAC GCAATCAACG TGATTGGTTG GAAAATCACA AAAAACTTAC CGCACTTCAG
CAAGATTGGT TAGCCTATAA GGGCTATGAC AATTAG
 
Protein sequence
MSILLIDLSS QELRQEEIEL LEHPLVAGLI LFSRNFYDIE QIRHLIRSVR QKVKKPLLIT 
VDQEGGRVQR FRQGFTQLPA MQSFACLLSD PQEQQEMAWR AGWQMAAEMT ALDIDLSFAP
VLDLGHQCKA IGDRSFHYEE KKLIELAEKF IQGMRQIGMS ATGKHFPGHG HVLADSHLET
PYDDRAKELI FAQDIRPFQS LIKQGLLDAV MPAHVIYTQC DNQPASGSSY WLKEVLRQQL
GFQGAIFSDD LGMKGAGFMG DFVARCTQSL QAGCDLLLLC NEPEAVVQVL DRFKPQESQN
KRIIRQTRLN KLFKKQRIDW QTLRNQRDWL ENHKKLTALQ QDWLAYKGYD N