Gene HS_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1126 
SymbolmreC 
ID4240627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1263462 
End bp1264517 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content36% 
IMG OID638104689 
Productrod shape-determining protein MreC 
Protein accessionYP_719338 
Protein GI113461269 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.16039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA TTTTCAGTAA ATCACCTCCT TTAGGTATTC GGCTTATTTT AGCCGTGGTA 
GTTTCTATCA CTTTAATTCT GTTTGATGGC AAAACTAGTG CAATGATTAA TCTTCGTGGT
TTTATGGAAA CTGCGGTAGG AAGTTTATAT TATTTAGCCA ATACGCCACG TGTTATACTG
GACGGTGTAT CAGAAAATTT GATCGATACA AATAAATTGC AAATCGAAAA TAAAGTATTA
CGTGAACAAT TACGAGAAAA AAATGCTGAT TTGCTCTTGT TGGATCACTT AAAAGTTGAA
AATCAGCGTT TACGTTTATT GTTAAATTCG CCACTAAGAA CAGATGAATA TAAAAAAATT
GGTGAAATTT TAACCGCTGA AACGGATGTT TATCGCCAAC AAGTTATTAT CAATCAAGGT
GCGAAAGACG GTGCTTATGT TGGACAGCCT GTTATTGATG AAAAAGGTGT GGTTGGTCAG
ATTATTTCAG TGGGGGAAAA TACTAGTCGA GTATTATTAT TAACTGATGT CATGCATTCT
TTACCTGTTC AAGTTTTACG CAATGATGTA CGTGTAATTG CCAGTGGAAC AGGGCGAAGT
GATGAATTGA CTTTAGAGAA TGTGCCGAGA TCGGTCGATA TTATAAAAGG TGATTTGCTT
GTTACGTCTG GACTTGGGGG GCGTTTTTTA GAAGGTTATC CCGTCGCAAT TGTGGAAAAT
ATTTCTCGTG ATAGTAAAAA TTACTTTGCC ACTATTACAG CTAAACCTTT GGCTTCTATA
GAACGTTTAC GCTATATTTT ACTACTTTGG CCAACGCATG AAGATATGCG TAAAGCACAA
TCTCTGACAC CTGAAGATGT TCGTAAAGCA GTGCAACAAC GTCTAGAAAT GCAGCATAAT
TCTTCTCTAT ATAAGGTGAA AAAGACTCCG GTACAGGAGG AATTTTTTCC ATCCAATAAT
AATACAGATG AGTATTCAGT AGATATATTA GAAACCTTAC CGGAAAATTT ACCTGAGCAA
GAGTTTCTAC AAAAAGAGCA GGGGGATGAA AATTAA
 
Protein sequence
MKPIFSKSPP LGIRLILAVV VSITLILFDG KTSAMINLRG FMETAVGSLY YLANTPRVIL 
DGVSENLIDT NKLQIENKVL REQLREKNAD LLLLDHLKVE NQRLRLLLNS PLRTDEYKKI
GEILTAETDV YRQQVIINQG AKDGAYVGQP VIDEKGVVGQ IISVGENTSR VLLLTDVMHS
LPVQVLRNDV RVIASGTGRS DELTLENVPR SVDIIKGDLL VTSGLGGRFL EGYPVAIVEN
ISRDSKNYFA TITAKPLASI ERLRYILLLW PTHEDMRKAQ SLTPEDVRKA VQQRLEMQHN
SSLYKVKKTP VQEEFFPSNN NTDEYSVDIL ETLPENLPEQ EFLQKEQGDE N