| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1123 |
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| Symbol | priA |
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| ID | 4240624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1260010 |
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| End bp | 1262202 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104686 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_719335 |
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| Protein GI | 113461266 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0274294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG CACGAGTTGC TCTTGCCGTT CCTCTGTTTA GTTTTTTTGA TTATCTTATT
CCAAATGCCC TTTCAACCGC TGTCGGCTGT CGAGTATTAG TCCCTTTCGG ACGACAAAAA
TTAATTGGTA TTGTCACTGA GTTACCTGAA AAAACGGAGA TAGATATTTC ACAACTCAAA
CCCATTATCT CCGTTCTTGA TCATCATTCT GTTTTTACCC CTGAATTATG GCGTCTACTA
CATTGGGGAG CGGACTATTA TCAATTTCCC TTAGGAGAAG TATTAATAAG CAGCTTGCCA
AGCAAATTAC GCCGTGGTGA AAGTGCGGTA GAAAAATCAA CATTTTTCTT TCAACTAACG
GAACAGGGGC AACAAGCATT AGACAACAAC AAATTAAAAA GAGCAAAAAA ACAGCTTGAG
GCTCTACATT ATCTACAAAA CAATATCACA GAAAAAAATA ACAATCCTTT TCATAACCAA
GTTTGGAGCA CCTTAAAAAG TAAGGGATAT ATATCTGAAC AAGAAATACA TAAAACAAGT
ATCTCTTGGC AACAAAAATT AAATCATCAA TCTATTGTAA AAACTAACGA TCGCCTTCCC
CTTAACCAAG AGCAAGCTCT TGCACTCAGC CAATTAACCT TTCAATCCGG ATTTATCTGT
TGGTTATTAG AAGGCGTAAC CGGTTCAGGA AAAACAGAAA TCTATCTTCA ATTTATTGAG
GAAATTTTAC AACAAGAGAA ACAAATTTTA GTACTGGTAT CGGAAATTGG TCTCACGCCA
CAAACAGTAC AACGCTTTCA AGCGAGATTT AATATTGAAA TTGATGTGTT ACATTCAAAT
TTAAATGATA ACCAACGTTT GAAAGTATGG CAACGTTCTA AAAATGGCGA AAGTGCGGTC
ATCATCGGCA CGAGATCAGC ACTATTTACT CCCTTTAAAC AACTGGGGCT AATTATCGTT
GATGAAGAAC ATGATCTTTC ATTTAAACAA CAAGATAACT GGCGTTATCA TGCTCGTGAT
CTTGCAGTAG TTTACGCTAA ACAATTGGAT ATTCCTATCG TGTTAGGATC TGCAACGCCA
AGTTTGGAAA GCATCAATAA TGTGCGACAA GGCAAATATC GTCACATCAC ACTCAAAAAA
AGAGCAAGAA ATACTACCGC ACTTCGTCAT TCGGTTATCG ACCTAAAGCG ACAAATAGTA
CATAACGGTT TATCTGAAAC CTTGTTGACA ATGATGAAAA ATCACTTAAA AAAGGGAAAT
CAGGTTTTAT TGTTCTTAAA CCGCCGTGGT TTCGCACCTG TTCTACTTTG TCATGAATGT
GGCTGGATTG TAGAATGCCA ACATTGTGAA AAGCCTTATA CTTATCATCA ACATCAGCGA
GTTCTACGTT GCCACCATTG CGGAACACAA AAACCTATTC CAATGCAATG TGTAAATTGC
GGTTCGACAC ATTTAGTGAC GACAGGTTTA GGAACAGAAC AATTGGAAGA AAGTTTAAAC
CAACGTTTTC CAAACTATAA GATTACCCGT ATTGACAGAG ATAGTACCGC TCGAAAAGGA
AAATTGGAAC AATATCTACG GGATATTCAA TTAGGCAAAA GCCAAATTTT AATTGGTACA
CAAATGCTAG CCAAAGGGCA TCATTTCCCC AATGTAACTT TAGTGGCACT GTTAAACGTG
GATAGTGCAC TTTTTTCTAC TGATTTTCGG GCAGAAGAAC GTTTAGCCCA ACTTTATGTT
CAAGTTGCAG GACGAGCCGG ACGAGAAGAA AAACAAGGAG AGGTCGTCTT GCAAACCCAC
TATCCGGAAC ATCCTTTATT GGTTAGTTTA TTAAGTCAAG GTTATCCTTA CTTTGCCCAA
CAAGCCCTCA CTTTGCGTAA CCAAATGGGG TTACCGCCTT TCAGTGCTCA AGCACTGTTT
AAAGCCCGAA GTCGCCACTC ACAAAAAGCT GAGGAAGTGT TACACCAAAT TGCCGCCTAT
TTTCATAATA CCTCAAGCAA AAACTTGCAA ATCTTGGGGC CTATCCAAGC ACCTTTTAGC
AAAAAAGCGG GGCAATATCG CTGGCACCTT TTATTACAAC ATAAATCCAA AGCAGAATTA
CAACAAATTT TACACTCTTT TCAGCAAGAA AATTTTTTAA GATTACAACA AGTGCGGTTA
GTTTTAGATA TAGATCCGCT GGATTTGAGC TAG
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| Protein sequence | MKLARVALAV PLFSFFDYLI PNALSTAVGC RVLVPFGRQK LIGIVTELPE KTEIDISQLK
PIISVLDHHS VFTPELWRLL HWGADYYQFP LGEVLISSLP SKLRRGESAV EKSTFFFQLT
EQGQQALDNN KLKRAKKQLE ALHYLQNNIT EKNNNPFHNQ VWSTLKSKGY ISEQEIHKTS
ISWQQKLNHQ SIVKTNDRLP LNQEQALALS QLTFQSGFIC WLLEGVTGSG KTEIYLQFIE
EILQQEKQIL VLVSEIGLTP QTVQRFQARF NIEIDVLHSN LNDNQRLKVW QRSKNGESAV
IIGTRSALFT PFKQLGLIIV DEEHDLSFKQ QDNWRYHARD LAVVYAKQLD IPIVLGSATP
SLESINNVRQ GKYRHITLKK RARNTTALRH SVIDLKRQIV HNGLSETLLT MMKNHLKKGN
QVLLFLNRRG FAPVLLCHEC GWIVECQHCE KPYTYHQHQR VLRCHHCGTQ KPIPMQCVNC
GSTHLVTTGL GTEQLEESLN QRFPNYKITR IDRDSTARKG KLEQYLRDIQ LGKSQILIGT
QMLAKGHHFP NVTLVALLNV DSALFSTDFR AEERLAQLYV QVAGRAGREE KQGEVVLQTH
YPEHPLLVSL LSQGYPYFAQ QALTLRNQMG LPPFSAQALF KARSRHSQKA EEVLHQIAAY
FHNTSSKNLQ ILGPIQAPFS KKAGQYRWHL LLQHKSKAEL QQILHSFQQE NFLRLQQVRL
VLDIDPLDLS
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