Gene HS_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1116 
Symboltpn 
ID4240617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1252323 
End bp1252976 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID638104679 
Producttransposase 
Protein accessionYP_719328 
Protein GI113461259 
COG category[L] Replication, recombination and repair 
COG ID[COG3676] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.651522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA CTCATTGTAA ATTAAAGAAA TCTATACAGA AAAAGCTCCT TGAGTTTTTT 
GTGTTAGAAG TGACAGCTCG ATCAGCAGCT AATATTTTAG GTATCAATCC AAATTCAAGT 
GCCTTGTTTT ATCGTAAAAT TCGTGAAGTC ATCAGCTATC ATTTAGCTCT TGAAGCCGAT 
GATGTTTTTG ATGGACAGAT TGAGTTTGAT GAAAGCTATT TTGGTGGTCA TCGTAAAGGA 
AAACGAGGGC GTGGAGCAAC CGGTAAAGTG GCTGTTTTTG GCTTGTTAAA ACGACAGGGA 
AAGGTATTTA CGGTGGTGGT AGAAAATACC AAAACAGAAA CGATAATGCC TGTAATCACA 
AGGAAAATCA AGCCTGACAG TTGGGTTTAT ACCGATACAT ATCGTAGCTA TGATGCTCTT 
GATGTGAGCC AATTTCACCA CGAACGCATC AATCATTCGG AGTTGTTTGC AGTGAAAGAA 
AATCACATCA ACGGTATAGA AAACTTTTGG AGTCAAGCCA AACGGATACT CCGAAAATAT 
AATGGAATTG ACCGAAAAAA CTTTCCTTTG TTCTTGAAGG AATGTGAATT TCGGTTTAAC 
TTTGGAACAC CAAAAGAGCA GTTAAAAACA TTGCGAAAAT GGTGTGGAAT TTAG
 
Protein sequence
MKITHCKLKK SIQKKLLEFF VLEVTARSAA NILGINPNSS ALFYRKIREV ISYHLALEAD 
DVFDGQIEFD ESYFGGHRKG KRGRGATGKV AVFGLLKRQG KVFTVVVENT KTETIMPVIT 
RKIKPDSWVY TDTYRSYDAL DVSQFHHERI NHSELFAVKE NHINGIENFW SQAKRILRKY 
NGIDRKNFPL FLKECEFRFN FGTPKEQLKT LRKWCGI