| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1107 |
|---|
| Symbol | |
|---|
| ID | 4240608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1243057 |
|---|
| End bp | 1243902 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104670 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_719319 |
|---|
| Protein GI | 113461250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2961] Protein involved in catabolism of external DNA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAGTT ATCGTCACAG TTTTCACGCA GGTAATCATG CTGACGTGTT GAAACATATT
GTTTTAATGT TGATTATTGA AAATTTAAAA TTAAAAGAAA AAGGATTTTA TTATTTAGAT
ACACACTCTG GTGTCGGGCG TTATCGTTTA TTCGGTGATG AAGCGGAAAA AACAGCGGAA
TATCGAGAGG GGATTGCTCG ACTTTGGGCA AAAGAGGATT TACCCGAGGC AATTCAACGT
TATATTTCTT TAATTAAAAA GCTGAATTAC GGTGGTAAAG AATTACGTTA TTATGCAGGT
TCGCCCCTGA TTGCCGCACA ACTTTTACGC TCACAAGATC GTGCATTGTT AACGGAGTTA
CATCCGGCAG ATTATCCTTT GTTACGCAAT GAATTTAAGG AAATCAATAA CATTAGTACA
AAGCGGGATA ATGGTTTTCA GCAGTTGAAA GCGACTTTAC CGCCTAAAGA ACGTCGAGGT
TTGATCTTAA TTGATCCACC TTATGAACTA AAAGAAGATT ATGATCTTGT GGTAAAAGCA
ATTGAAGAGG GATATAAACG TTTTGCAACT GGTATTTACG CCCTTTGGTA TCCGGTTGTA
TTACGACAAC AAACTAAACG AATCATCAAG GGCTTGGAAA ATAGCGGCAT TCGTAAAATT
TTGCAGATTG AATTAGCGGT ACGTCCGGAC TCCGAACAAC GAGGAATGAC TGCAAGTGGC
ATGATTGTGA TTAATCCGCC ATGGACATTA GAAGATCAAA TGAAAAAAAT CTTGCCTTAT
TTGACCCGCA CTTTAGTACC AGAAGGAACT GGTAATTGGT CTGTAAAATG GATTACGCCG
GAATAG
|
|---|
| Protein sequence | MLSYRHSFHA GNHADVLKHI VLMLIIENLK LKEKGFYYLD THSGVGRYRL FGDEAEKTAE
YREGIARLWA KEDLPEAIQR YISLIKKLNY GGKELRYYAG SPLIAAQLLR SQDRALLTEL
HPADYPLLRN EFKEINNIST KRDNGFQQLK ATLPPKERRG LILIDPPYEL KEDYDLVVKA
IEEGYKRFAT GIYALWYPVV LRQQTKRIIK GLENSGIRKI LQIELAVRPD SEQRGMTASG
MIVINPPWTL EDQMKKILPY LTRTLVPEGT GNWSVKWITP E
|
|---|
| |