Gene HS_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1091 
Symbol 
ID4240591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1221334 
End bp1222575 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content36% 
IMG OID638104653 
Productserine/threonine transporter SstT 
Protein accessionYP_719303 
Protein GI113461234 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.255112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGT CATATTTATA CTCGTTCTTT TTTCATGGAA GTTTGGTCAA GCGAATTTCT 
GTTGGTCTTT TATTGGGATT GCTGTTAGCA TTAATCGCTC CATCATTGCA AGGTGTATTA
GGTTTTAATC TTGCAGAAAA AGCCGGTTTT TTAGGAAAAA TATTTGTGCG TTCATTGCGT
GCAGTTGCCC CAATTTTAGT TTTTTTATTG GTTATTTCTG CAATTGCTAA TAAGCAATTA
GGCACAAAAA GCAATATGAA ATCTATTGTT GTCTTATATT TGCTAGGAAC TTTCTTAGCT
GCATTGACAT CAGTATTATT TAGTTTTGCA TTGCCGACAG AAATTGCTTT AAAAACGCAA
GAAGGCTCTC TTTCTCCGCC AAACGAAGTA TCTGAAGTTT TAAGTACTTT AGTACTGAAC
GTGGTAGATA ATCCAATTAA TGCTTTATTT AATGCAAACT TTATTGGTAT CTTATTTTGG
GCAATAGGTT TGGGGATAGC CTTACGCTAT GCGTCAGATA CGACTAAAAA TGTCATGAAT
GATTTTTCAG AGGCTGTATC TAGAATTGTT CATTTTATTA TTAGTTTTGC ACCTATCGGT
GTTTTTGGTT TGGTGGCTGA AACTTTAACT GATAAAGGTT TGGGTGCATT GCTTGATTAT
ATGCAATTAC TAGTTGTTTT AATTGGGTCT ATGCTATTTA CTGCATTTGT TATTAATCCA
ATTTTAGTTT TTTGGAAAAT TCGTCGTAAT CCATATCCCC TAGTATGGAC TTGTGTACGA
GAAAGTGGAT TAACGGCATT CCTTACACGT AGTTCTGCAG CAAATATTCC TGTAAATATG
GAATTGTCAA AACGCTTAAA ATTAGATGAG GAAACTTATT CAGTTTCAAT ACCGTTAGGT
GCTAATATCA ATATGGCGGG TGCGGCGATT ACTATTACGG TATTAACATT AGCTGCTGTA
CATACCTTAG GTATTGAGGT CTCTTTCCCT ACGGCTGTAT TGTTAAGTGT AGTGGCTAGT
ATTTGTGCTT GTGGTGCTTC TGGTGTTGCT GGCGGATCAT TATTATTGAT TCCATTAGCT
TGTAGTTTAT TTGGTATTCC TAATGATATT GCAGCACAAG TAATCGGCGT CGGTTTCGTC
ATTGGCGTAT TACAAGATTC AACGGAAACT GCATTAAACT CTTCAACGGA TGTTATTTTT
ACAGCTGCGG TATGCTGGAG TGAAGAAAAT AAAAATTCAT AG
 
Protein sequence
MNKSYLYSFF FHGSLVKRIS VGLLLGLLLA LIAPSLQGVL GFNLAEKAGF LGKIFVRSLR 
AVAPILVFLL VISAIANKQL GTKSNMKSIV VLYLLGTFLA ALTSVLFSFA LPTEIALKTQ
EGSLSPPNEV SEVLSTLVLN VVDNPINALF NANFIGILFW AIGLGIALRY ASDTTKNVMN
DFSEAVSRIV HFIISFAPIG VFGLVAETLT DKGLGALLDY MQLLVVLIGS MLFTAFVINP
ILVFWKIRRN PYPLVWTCVR ESGLTAFLTR SSAANIPVNM ELSKRLKLDE ETYSVSIPLG
ANINMAGAAI TITVLTLAAV HTLGIEVSFP TAVLLSVVAS ICACGASGVA GGSLLLIPLA
CSLFGIPNDI AAQVIGVGFV IGVLQDSTET ALNSSTDVIF TAAVCWSEEN KNS