| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1084 |
|---|
| Symbol | miaA |
|---|
| ID | 4240584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1202089 |
|---|
| End bp | 1203024 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638104646 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_719296 |
|---|
| Protein GI | 113461227 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AATCAACTGC TATCTTTTTA ATGGGGCCAA CCGCTTCCGG CAAAACCGAC
CTCGCTATCC AATTACATCA AGAACTTCCT GTTGAAGTCA TCAGTGTCGA TTCAGCTTTA
ATTTATAAAG GCATGGACAT TGGTACAGCA AAACCCAATG CACAAGAATT AGCACTAACA
CCTCATCGTC TAATTGATAT TAAAGATCCA AGTGAAAATT ATTCTGCTGC AGAATTTCGT
CATGACGCAT TACAAGAAAT GCAAAAAATC ACGCAACAAG GAAAAATTCC ACTTCTTGTT
GGCGGTACAA TGTTGTATTA CAAAGCCTTA TTGGAAGGAC TTTCGCCGCT TCCTTCAGCG
GATGAAAAAG TGCGGTTGGA AATAGAACAA AAAGCAGAAA AATTTGGTTG GGCAACACTA
CACAACGAAT TAGCCAAAAT CGACCCAATC TCGGCACAAC GTATAAATCC CAACGACAGC
CAGCGAATTA ATCGTGCATT GGAGGTCTTC TATTTAACAG GGCAATCATT AACGGAATTA
ACCGCACAAA AAGGCAAAGA AATTCCTTAT CACATCATAC AATTTGCTAT CGCACCTGAT
CGAGCTGTTT TACACCAACG CATTGAACAA CGTTTTCACA AAATGATCGA ACAAGGCTTT
CAACAGGAAG TCGAAAAACT TTATCAACGC TCGGATCTAC ACCCTAACCT ACCTTCTATT
CGTTGTGTCG GTTATCGACA AATGTGGGAA TATTTACAGG GTAATTATGA TAAAGACGAA
ATGATATTTA GAGGTATTTG TGCCACAAGA CAATTAGCAA AACGACAACT TACTTGGTTA
CGTGGTTGGA AATCGCCCAT AGAATGGCTA GACAGCCTAA ACCCCAAAAG CACGAAAGAA
AAAATCATAA AAACTATAAA ACATAACTGT AAATAA
|
|---|
| Protein sequence | MNKKSTAIFL MGPTASGKTD LAIQLHQELP VEVISVDSAL IYKGMDIGTA KPNAQELALT
PHRLIDIKDP SENYSAAEFR HDALQEMQKI TQQGKIPLLV GGTMLYYKAL LEGLSPLPSA
DEKVRLEIEQ KAEKFGWATL HNELAKIDPI SAQRINPNDS QRINRALEVF YLTGQSLTEL
TAQKGKEIPY HIIQFAIAPD RAVLHQRIEQ RFHKMIEQGF QQEVEKLYQR SDLHPNLPSI
RCVGYRQMWE YLQGNYDKDE MIFRGICATR QLAKRQLTWL RGWKSPIEWL DSLNPKSTKE
KIIKTIKHNC K
|
|---|
| |