Gene HS_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1070 
SymbolproQ 
ID4240569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1185960 
End bp1186595 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content37% 
IMG OID638104631 
Productputative solute/DNA competence effector 
Protein accessionYP_719282 
Protein GI113461213 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.265506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA TTCAAAAATT AACAAATAAC AAAGAAATTA TTGCTTACTT AGCAGAAAAG 
TTCCCATTAT GTTTTTCATT GGAAGGTGAA GCGAAACCAT TGAAAATTGG TTTATTTCAG
GATTTGGCTG AAGCGTTAGC AAACGATGAA AAAGTGAGTA AAACTCAATT ACGCCAAGCC
TTGCGTCAAT ATACTTCTAA CTGGCGTTAT TTACATGGTT GTCGTGCCGG TGCGGTACGT
GTGGATTTAA ATGGTGAACC TGCCGGTATT TTAGAACAAG AGCATGTTGA GCATGCCGCA
GCTAAGTTAG CAGAAGCTAA AGCGAAAGTT GCTGAAAGAC GTGCGGTTGA AAAAGCAAAT
AATCCAAAAG CAAATAAAAA ACGCTCTGTA TATCATTCAG GGAATAAGTC AGAAAATAAG
AAATCAGCTG GAAAGAAATT CTCCAAACCC CGTCAAGTTG AACAAATTTT TGTCAACGTT
GATTTAGCAA ATTTACAAAA AGGAGATGTG GTGAGAGTTA AAGCGGGAGA TAAAACTACT
AAGGCTGAGA TATTAGAAGT GGTTAAAGAG GGTGCCCGTG TTGAATTAGA GAATGGATTG
ATATTAACTG TAAGTGCGGA TCGTTTATTT GCGTAA
 
Protein sequence
MTEIQKLTNN KEIIAYLAEK FPLCFSLEGE AKPLKIGLFQ DLAEALANDE KVSKTQLRQA 
LRQYTSNWRY LHGCRAGAVR VDLNGEPAGI LEQEHVEHAA AKLAEAKAKV AERRAVEKAN
NPKANKKRSV YHSGNKSENK KSAGKKFSKP RQVEQIFVNV DLANLQKGDV VRVKAGDKTT
KAEILEVVKE GARVELENGL ILTVSADRLF A