Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1066 |
Symbol | |
ID | 4240564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1179629 |
End bp | 1180993 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638104627 |
Product | sodium-dependent transporter |
Protein accession | YP_719278 |
Protein GI | 113461209 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.094867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAACA CCCCAAAAAG ACAAACTTGG TCCAGTCGAT TAACCTATGT CATGACAGTA GCCGGAGCAA CCGTTGGATT TGGTGCAACT TGGCGATTTC CTTATTTAGT AGGTGAAAAT GGCGGCGGTG CTTATGTACT GCTCTTTTGT ATTGCCATGT TAGTTATCGG CATTCCAATG ATTTTAGTGG AAAATGTCAT CGGTCGTCGC TTACGTGTTA ATTCAATTGA TGCATTCAGT GATAAATTAG AAGGAAAAAA TATTTCTAAA GCGTGGAAAA TTATTGGCTA TATGGGATTA CTCGGTGCAT TTGGTATTAT GGCGTACTAT ATGGTACTTG GTGGTTGGGT AATGAATTAT ATCATCAATC TCATTACCGG TTCCCTAGAT ATTTCATCGG TAATTAACAA AGAATATGCC CAAAATTTTT ATCAAGAGAG TATTACTGAA AGTCCGCTAC AAATCATAAT TTATACACTG ATTTTTGTCG TCATTAACTA TATTATTCTT GCTAAAGGAA TTATTGGCGG CATTGAGCAA GCGGTAAAAT ATTTGATGCC CTTATTGTTT ATTTGCCTTA TCGGTATGGT TATTCGTAAC GTTACTTTAC CGGGAGCAAT GGAAGGAATT ATTTATTACC TCAAACCTGA TTTTTCTAAA ATCACGCCAC AATTGTTTAT CCTCGTACTT GGACAAGTTT TCTTTGCACT AAGTTTGGGA TTTGGTGTAA TTATCACACT TTCCAGTTAC CTCAGCAAAG AAGAAAATCT CATCCAAACC GCCGTTATAA CCGGATTTAC AAATACAATT ATAGCTGTCC TGTCAGGCTT TATGATTTTC CCGTCATTAT TTACTTTTGG GATTGAACCG AATGCAGGAC CAACCTTAGT TTTCCAAAGT TTACCCATTG TTTTCTCACA CTTATGGGCA GGGCGTATTT TTGCTGTTGT CTTCTTTAGC TTACTGCTCA TCGCAGCCCT AACAACCTCA ATCACCATTT ATGAAGTAAT TATTACCGCA CTACAAGAAA AACTTAGAAT GCGTCGTGCA AAAGCAATTT TTATCACGTT AGGCACAATT TTCTTAATCG GTAATATTCC ATCAATATTA AGTGATAATT TGTTAAAAGA CGTCACATTC TTTGGTAAAA GTATCTTCGA TACGTTTGAC TATGTCAGCG GTAATATTTT ATTTTTATTG ACCGCACTTG GGTGTGCTAT TTTTGTAGGC TTTGTACTAA AAGAAGATGC GATAAAAGAA CTCTCCCCAA ATCCAAATTC TTTATTGACT CAGATTTGGT TCAATTATGT AAAATTTGCT GTACCATTAA TTATTATCGT GATTTTTGTA AGTAATTTTG TTTAA
|
Protein sequence | MTNTPKRQTW SSRLTYVMTV AGATVGFGAT WRFPYLVGEN GGGAYVLLFC IAMLVIGIPM ILVENVIGRR LRVNSIDAFS DKLEGKNISK AWKIIGYMGL LGAFGIMAYY MVLGGWVMNY IINLITGSLD ISSVINKEYA QNFYQESITE SPLQIIIYTL IFVVINYIIL AKGIIGGIEQ AVKYLMPLLF ICLIGMVIRN VTLPGAMEGI IYYLKPDFSK ITPQLFILVL GQVFFALSLG FGVIITLSSY LSKEENLIQT AVITGFTNTI IAVLSGFMIF PSLFTFGIEP NAGPTLVFQS LPIVFSHLWA GRIFAVVFFS LLLIAALTTS ITIYEVIITA LQEKLRMRRA KAIFITLGTI FLIGNIPSIL SDNLLKDVTF FGKSIFDTFD YVSGNILFLL TALGCAIFVG FVLKEDAIKE LSPNPNSLLT QIWFNYVKFA VPLIIIVIFV SNFV
|
| |