Gene HS_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1066 
Symbol 
ID4240564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1179629 
End bp1180993 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content36% 
IMG OID638104627 
Productsodium-dependent transporter 
Protein accessionYP_719278 
Protein GI113461209 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.094867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA CCCCAAAAAG ACAAACTTGG TCCAGTCGAT TAACCTATGT CATGACAGTA 
GCCGGAGCAA CCGTTGGATT TGGTGCAACT TGGCGATTTC CTTATTTAGT AGGTGAAAAT
GGCGGCGGTG CTTATGTACT GCTCTTTTGT ATTGCCATGT TAGTTATCGG CATTCCAATG
ATTTTAGTGG AAAATGTCAT CGGTCGTCGC TTACGTGTTA ATTCAATTGA TGCATTCAGT
GATAAATTAG AAGGAAAAAA TATTTCTAAA GCGTGGAAAA TTATTGGCTA TATGGGATTA
CTCGGTGCAT TTGGTATTAT GGCGTACTAT ATGGTACTTG GTGGTTGGGT AATGAATTAT
ATCATCAATC TCATTACCGG TTCCCTAGAT ATTTCATCGG TAATTAACAA AGAATATGCC
CAAAATTTTT ATCAAGAGAG TATTACTGAA AGTCCGCTAC AAATCATAAT TTATACACTG
ATTTTTGTCG TCATTAACTA TATTATTCTT GCTAAAGGAA TTATTGGCGG CATTGAGCAA
GCGGTAAAAT ATTTGATGCC CTTATTGTTT ATTTGCCTTA TCGGTATGGT TATTCGTAAC
GTTACTTTAC CGGGAGCAAT GGAAGGAATT ATTTATTACC TCAAACCTGA TTTTTCTAAA
ATCACGCCAC AATTGTTTAT CCTCGTACTT GGACAAGTTT TCTTTGCACT AAGTTTGGGA
TTTGGTGTAA TTATCACACT TTCCAGTTAC CTCAGCAAAG AAGAAAATCT CATCCAAACC
GCCGTTATAA CCGGATTTAC AAATACAATT ATAGCTGTCC TGTCAGGCTT TATGATTTTC
CCGTCATTAT TTACTTTTGG GATTGAACCG AATGCAGGAC CAACCTTAGT TTTCCAAAGT
TTACCCATTG TTTTCTCACA CTTATGGGCA GGGCGTATTT TTGCTGTTGT CTTCTTTAGC
TTACTGCTCA TCGCAGCCCT AACAACCTCA ATCACCATTT ATGAAGTAAT TATTACCGCA
CTACAAGAAA AACTTAGAAT GCGTCGTGCA AAAGCAATTT TTATCACGTT AGGCACAATT
TTCTTAATCG GTAATATTCC ATCAATATTA AGTGATAATT TGTTAAAAGA CGTCACATTC
TTTGGTAAAA GTATCTTCGA TACGTTTGAC TATGTCAGCG GTAATATTTT ATTTTTATTG
ACCGCACTTG GGTGTGCTAT TTTTGTAGGC TTTGTACTAA AAGAAGATGC GATAAAAGAA
CTCTCCCCAA ATCCAAATTC TTTATTGACT CAGATTTGGT TCAATTATGT AAAATTTGCT
GTACCATTAA TTATTATCGT GATTTTTGTA AGTAATTTTG TTTAA
 
Protein sequence
MTNTPKRQTW SSRLTYVMTV AGATVGFGAT WRFPYLVGEN GGGAYVLLFC IAMLVIGIPM 
ILVENVIGRR LRVNSIDAFS DKLEGKNISK AWKIIGYMGL LGAFGIMAYY MVLGGWVMNY
IINLITGSLD ISSVINKEYA QNFYQESITE SPLQIIIYTL IFVVINYIIL AKGIIGGIEQ
AVKYLMPLLF ICLIGMVIRN VTLPGAMEGI IYYLKPDFSK ITPQLFILVL GQVFFALSLG
FGVIITLSSY LSKEENLIQT AVITGFTNTI IAVLSGFMIF PSLFTFGIEP NAGPTLVFQS
LPIVFSHLWA GRIFAVVFFS LLLIAALTTS ITIYEVIITA LQEKLRMRRA KAIFITLGTI
FLIGNIPSIL SDNLLKDVTF FGKSIFDTFD YVSGNILFLL TALGCAIFVG FVLKEDAIKE
LSPNPNSLLT QIWFNYVKFA VPLIIIVIFV SNFV