| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1064 |
|---|
| Symbol | rnfE |
|---|
| ID | 4240562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1178306 |
|---|
| End bp | 1178962 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638104625 |
|---|
| Product | electron transport complex RsxE subunit |
|---|
| Protein accession | YP_719276 |
|---|
| Protein GI | 113461207 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
|---|
| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0737938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACTGTAA ACAAGGTTAA AACCGAAAGT GTATGGGCAA ATTTATTTAA ACAAGGATTT
TGGCATAACA ACCCTGCCCT AGTTCAGCTA TTAGGACTCT GCCCTTTACT TGCGGTATCA
AATTCAGCGA CAAATGCGTT AGGTTTAGGC ATTGCAACTA TTATCGTTTT AATTTGTAGC
AATACTGTAG TTTCTTTGTT TCGCAAACAA ATCCCTCAAG AGATCCGTAT CCCCATTTAT
GTGATGATTA TTGCGACTAC GGTAACGATA GTGCAACTTA TCATGAATGC TTATACTTAC
ACCCTTTATC AAGCATTAGG TATTTTTATT CCATTGATTG TGACCAACTG CATTGTGATT
GGGCGTGCGG AAGCGTTTGC CTCAAAAAAT ACCGTTTTAC ATTCTATTTT TGATGGGTTT
GCTATGGGAC TTGGTATGAC CTTCAGTTTG TTTATTTTAG GTGCATTACG TGAAATTTTC
GGTACGGGGA AATTATTTTT TGGTATAGAA AATTTATTTG GCGACTGGGC AAAATGTTTA
CAACTGAACC TATTTCAATT AGACAATAGT TTCTTACTGG CAATCTTACC GCCCGGAGCG
TTTATCGGTC TAGGCATTAT GTTAGCAATA AAAAACGTGA TAGATCACAG AAAATGA
|
|---|
| Protein sequence | MTVNKVKTES VWANLFKQGF WHNNPALVQL LGLCPLLAVS NSATNALGLG IATIIVLICS
NTVVSLFRKQ IPQEIRIPIY VMIIATTVTI VQLIMNAYTY TLYQALGIFI PLIVTNCIVI
GRAEAFASKN TVLHSIFDGF AMGLGMTFSL FILGALREIF GTGKLFFGIE NLFGDWAKCL
QLNLFQLDNS FLLAILPPGA FIGLGIMLAI KNVIDHRK
|
|---|
| |