| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1061 |
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| Symbol | rnfC |
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| ID | 4240559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1174542 |
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| End bp | 1176521 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638104622 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_719273 |
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| Protein GI | 113461204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC ATATAGATAT ATTAACCAAT TACAATTCAG GTAAACTTTG GGACTTTTAT
GGAGGTATTC ATCCGCCGGA GATGAAATCT CAGTCGAACC AAACCCCGAT AAAAAACTTG
CCTTTAGCTA ACACCTTTTA TGTTCCGGTC AAGCAACATG CCGGAAGTGC GGGTAATATT
TTGGTTAAGG TAGGAGATAG AGTCTTAAAA GGTCAAGCCT TAACGCTTGG CTCAGGTTTA
AACGCATTGC CTGTTCATGC CCCCACATCA GGTATTATCA AAAATATTGC CCCTTATGTT
GCCGCTCATC CTTCAGGTCT ATGCGAATTA AGTATTGAAA TTGAAGCCGA TGGATTGGAA
CAATGGCGAA AACGCCACTT AATAGAGGAC TTTTTAACAC TTAGCCGAGA ACAACTCATT
GATAAAATTT ACCAAGCGGG TATTGCAGGA TTAGGCGGTG CGGTTTTTCC AACCGCCGCC
AAAATTCGAT CAGCAAACAA TAAAGTTAAA CTATTAATTA TTAATGGTGC AGAATGTGAG
CCTTATATCA CTTGTGATGA TCGCTTAATG CGTGACTACA GCGAAGAGAT TATTGAGGGT
ATACGTATTC TTCGCTATAT CTTACGCCCT GAAAAAGCGG TGATTGCAAT TGAAGATAAT
AAACCGGAAG CTATCGCAGC ATTGCGACAA AGTTTGCATG GTGCTAACGA TATTGATATT
CGTGTCATTC CAACTAAATA TCCTTCCGGT GCAGCAAAGC AACTTATCCA AATTCTAACT
GGCGTTGAAG TGGCAAGCGG ACAACGCTCA TCCAGTATGG GTATTTTAAT GCACAATGTA
GGAACAGCTT TTGCCATAAA ACGTGCCATT ATTGATGATG AACCTTTAAT TGAACGAGTG
GTTACCTTAA CCGGAGATAA AATTGCACAA AAAGGGAATT TTTGGGTTCC TTTGGGAACG
CCAATCTCCC ATGTACTAAC ACAAGTCGCC TATCAATATG ACTCACGCTT CCCTGTTTTT
ATGGGCGGTC CGATGATGGG CTTTATCTTA CCCAATTTGT ATGCTCCCGT AACTAAAGCG
ACTAACTGCT TGCTGGCACC GGATCATTTT GAATATGAAC CGCCGGCAAC GGAACAATCT
TGTATTCGTT GCTCTGCTTG CTCCGATGCC TGCCCTGTAC ATTTAATGCC TCAACAACTG
TATTGGTTTG CCAGAGCGGA GGATCATAAA AAGTCCGAAG AATACGCCCT AAAAGAGTGT
ATTGAATGTG GTTTATGTGC CTATGTTTGT CCGAGTCATA TTCCTCTCAT TCAATATTTC
CGCCAAGAAA AAGCAAAAAT TTGGGAAATT AAAGAAAAGG CACAAAAATC AGAAGAAGCC
AAAATTCGTT TTGAGGCTCG TCAAGCTCGC TTAGAAAAAG AAGAACAAGA ACGCAGAGCA
AGGGTTAATA AAGCAGCGGA AAACCGCCGT GCAGAAATGG CACAACAAAA AGGAATTGAT
CCAGTTCAAG CCGCACTTGA ACGCTTAAAA GCGAAGAAAT CAATCGAAAC ACGTGAACAC
AACCAAGAAC AGAAAACGTT TATAAATATT AAAGGCGAAA TATTGCCTGA TAACAGCGAC
ATCATAGAGC AACGTAAAGC ACGTCGTTTG GCTCGTCAGC AAACCAATTC AAACAGCATT
CAAGAAATTG AAACTGTTGT ACAAAATTCG GAGAAAAATA CAGAAAAAAG TGCGGTACAA
TCTGACATAG ATCCGAAAAA AGCCGCTGTT GCCGCTGCTA TTTCTCGTGC TAAAGCAAAA
AAACAGGCTT CACAAATTAA TGCAAATAGT ATTTCGGAGC CTGATACTAC AATACAAAAT
ACAGAAAAAA GTGCGGTGCA ATCTGACATA GATCCGAAAA AAGCCGCTGT TGCCGCTGCT
ATTGCTCGTG CTAAAGCAAA GCAATTAGCA AAAAAACAAA TTGAAGTTAC CAATAAATGA
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| Protein sequence | MTQHIDILTN YNSGKLWDFY GGIHPPEMKS QSNQTPIKNL PLANTFYVPV KQHAGSAGNI
LVKVGDRVLK GQALTLGSGL NALPVHAPTS GIIKNIAPYV AAHPSGLCEL SIEIEADGLE
QWRKRHLIED FLTLSREQLI DKIYQAGIAG LGGAVFPTAA KIRSANNKVK LLIINGAECE
PYITCDDRLM RDYSEEIIEG IRILRYILRP EKAVIAIEDN KPEAIAALRQ SLHGANDIDI
RVIPTKYPSG AAKQLIQILT GVEVASGQRS SSMGILMHNV GTAFAIKRAI IDDEPLIERV
VTLTGDKIAQ KGNFWVPLGT PISHVLTQVA YQYDSRFPVF MGGPMMGFIL PNLYAPVTKA
TNCLLAPDHF EYEPPATEQS CIRCSACSDA CPVHLMPQQL YWFARAEDHK KSEEYALKEC
IECGLCAYVC PSHIPLIQYF RQEKAKIWEI KEKAQKSEEA KIRFEARQAR LEKEEQERRA
RVNKAAENRR AEMAQQKGID PVQAALERLK AKKSIETREH NQEQKTFINI KGEILPDNSD
IIEQRKARRL ARQQTNSNSI QEIETVVQNS EKNTEKSAVQ SDIDPKKAAV AAAISRAKAK
KQASQINANS ISEPDTTIQN TEKSAVQSDI DPKKAAVAAA IARAKAKQLA KKQIEVTNK
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