| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1055 |
|---|
| Symbol | mdh |
|---|
| ID | 4240553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1161299 |
|---|
| End bp | 1162234 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638104616 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_719267 |
|---|
| Protein GI | 113461198 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000618832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CTGTTTTAGG TGCGGCTGGG GGTATTGGTC AAGCATTGGC TCTGTTATTA
AAACTACAAT TACCTGCGGG TTCAGAATTA TCATTATATG ATATTGCACC TGTTACACCG
GGTGTTGCGG CTGATGTAAG CCATATTCCA ACAGCGGTGA AGATACAAGG TTTTGCAGGG
GAAGATCCAA CTCCCGCTTT AGAAAACGCT GATGTTGTAC TAATTTCTGC CGGTGTTGCT
CGTAAACCGG GAATGGATCG TTCAGATTTA TTTAATATTA ATGCAGGTAT TGTGAAAAAT
TTAATTGAAA AAGTCGCTAA AACTTGTCCT AAAGCCTGTG TGGGTATTAT TACCAATCCG
GTTAATACAA CAGTAGCAAT TGCTGCTGAA GTGCTGAAAA AAGCAGGCGT TTATGATAAA
CGTAAATTAT TTGGGGTAAC AACATTAGAT GTATTACGTT CTGAAACTTT TGTTGCTGAA
TTGAAAGGAC TCAATGTTTC ACGCATTGCG GTACCGGTAA TTGGCGGACA TTCCGGTGTG
ACGATTCTTC CATTGTTATC CCAAGTGCAA TATGCCGAAT GGGAAGAGGA CGAAATAGCA
CCATTAACAA AACGTATTCA AAATGCCGGT ACTGAGGTTG TTGAAGCGAA AGCGGGTGGC
GGTTCTGCTA CACTTTCAAT GGCTCAAGCA GCAGCACGTT TTGCTCTCTC ACTGGTACAG
GGGCTAAGTG GTGAAACTGT TGTGGAATGT ACGTATGTTG AAGGTGATGG TAAATATGCT
CGTTTCTTTG CACAACCTGT TCGCTTAGGA AAAGAAGGGG TAGAGGAAAT TTTACCGGTG
GGTACCTTAA GTGCATTTGA ACAAAAAGCC TTAGAAGATA TGTTGCCAAC TTTACGAGCT
GATATTGAAT TAGGCGAAAA ATTTGTCAAT AACTAA
|
|---|
| Protein sequence | MKIAVLGAAG GIGQALALLL KLQLPAGSEL SLYDIAPVTP GVAADVSHIP TAVKIQGFAG
EDPTPALENA DVVLISAGVA RKPGMDRSDL FNINAGIVKN LIEKVAKTCP KACVGIITNP
VNTTVAIAAE VLKKAGVYDK RKLFGVTTLD VLRSETFVAE LKGLNVSRIA VPVIGGHSGV
TILPLLSQVQ YAEWEEDEIA PLTKRIQNAG TEVVEAKAGG GSATLSMAQA AARFALSLVQ
GLSGETVVEC TYVEGDGKYA RFFAQPVRLG KEGVEEILPV GTLSAFEQKA LEDMLPTLRA
DIELGEKFVN N
|
|---|
| |