Gene HS_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1054 
SymbolmetR 
ID4240552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1160236 
End bp1161162 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content38% 
IMG OID638104615 
Producttranscriptional regulator 
Protein accessionYP_719266 
Protein GI113461197 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000193494 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA TTTTTCTTGA ATTGCGTCAT TTAAAAACGC TCATTGCGTT AAAAGAAACA 
GGGAGTGTTT CTTTGGCTGC AAAGAGAGTT TATTTAACTC AATCGGCACT TTCGCATCAA
ATTAAATTAT TGGAAGAACA ATATCAATTA CCTTTATTTG AGCGGAAAAG TCATCCTTTG
CGGTTTACAG CGGCAGGAGA GCGGTTGATC AAATTAGCCA ATGAAATTTT GCCTAAGGTC
ATGGAGACTG AACGAGCTTT ATCGAGAATT AAACAAGGAG AGGCGGGCGA GTTAAAAATA
GCTGTAGAAT GTCATACTTG TTTTGATTGG CTGATGCCTG CCATGGATAA TTTTCGTCAA
CATTGGCCTT TAGTTGAACT TGATATTGTG TCTGGATTCC ATACAGATGC TATTGGTTTA
TTGCTGAGTC ATCGAGCCGA TTGGGCGGTA GTATCAGAAA TTGAAGAAAC GCCGGGTATT
ATTCATAAGC CCTTGTTTTC CTATGAAATG GTTGGTTTGT GTGCAAAGGA TCATCCTTTG
GCGAGGAAAG AGGTTTGGCA AGCAGAAGAT TTTGTTGAGC AAACCTTGAT AACTTATCCT
GTGCCTGATG ATATGCTCGA TCTTCTACGT AAAGTTTTAC ATCCTAAAGG AATCAATCCT
TCTCGACGTA CAAGTGAATT AACTATTGCT ATTATTCAAC TTGTAGCAAG TAAACGTGGT
GTGGCGACAT TGCCGTTTTG GGCAGTAAAA CCTTATTTGG ATAGAGGCTA TGTTGTGGCA
AGAAAAATTA CTGATGAAGG GTTATATAGT GATCTCTATG GTGCTTTCCG AGAAACGGAT
AATGATGTTG CCTTTATTGA TGATTTCTAT GAGATTATTA AATCTCAACG TTTTTCTATC
TTGCCCGGAT TGTCTATTTT AGAATAG
 
Protein sequence
MKPIFLELRH LKTLIALKET GSVSLAAKRV YLTQSALSHQ IKLLEEQYQL PLFERKSHPL 
RFTAAGERLI KLANEILPKV METERALSRI KQGEAGELKI AVECHTCFDW LMPAMDNFRQ
HWPLVELDIV SGFHTDAIGL LLSHRADWAV VSEIEETPGI IHKPLFSYEM VGLCAKDHPL
ARKEVWQAED FVEQTLITYP VPDDMLDLLR KVLHPKGINP SRRTSELTIA IIQLVASKRG
VATLPFWAVK PYLDRGYVVA RKITDEGLYS DLYGAFRETD NDVAFIDDFY EIIKSQRFSI
LPGLSILE