| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1050 |
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| Symbol | ribD |
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| ID | 4240548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1157428 |
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| End bp | 1158558 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638104611 |
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| Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase |
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| Protein accession | YP_719262 |
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| Protein GI | 113461193 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.411969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCAA CATTTTCAGC TCAAGACGAA TATTTTATGC AGATAGCTTT AGAACTTGCG
AAAAAAGGCA TATTTACCAC AACACCTAAT CCTGCTGTGG GCTGTGTTTT AGTCAAAAAT
GGTGAAATTG TTGGGAGAGG TTTTCATTTT AAAGCGGGGC AACCCCATGC GGAAGTTATG
GCATTACGTG ATGCCGGTGA TAGAGCAAAG GGGGCAACTG CTTATGTGAC TTTAGAGCCT
TGTTCTCATT TCGGAAGAAC GCCTCCTTGT GCACAAGGAC TAATTGAAGC AGGTATTCGC
AACGTTATTG TGGCAATGAA AGATCCTAAT CCGCAAGTTG CAGGCAAAGG GTTAGCTATG
TTGCAAGCAG CAGGTATTGA AAGTGCGGTA GGATTATTAC AAGAAAAAGC GGAATTATTA
AACAAAGGTT TTTTAACACG AATGAGAACA CAGAAACCTT TTGTTATTTT GAAAATGGCA
ATAAGCCTTG ACGGTCGAAC TGCTATGGCT AATGGCGAGA GTAAATGGAT TAGCGGAGAA
CAGGCACGGC AAGACGTACA GCAAGAGCGG GCTAAAGTTT CTGCAATTTT ATCGACAGCT
AAGACGGTGT TAGCCGATGA TCCCTTGTTA AATCTTCGTT GGGAGCAATT TCCATCGGAA
TTACAACAAA ATTATAAAGT TGAAGAAGTG CGTCAACCTG TCAGAATTAT TCTTGATCGT
CTGCATCTTG TGACACCTCG TCATAAATTA TTTCAATGTC AATCTCCCGT TTGGCTGGTG
GGTGATAAAG AGCGTGATAT GTCAGCGTTT CCTGATTATT GTCAATATAT AAAATTATTC
CCAAGTAACG AGCATTCTTA TTTGGAAAAC TTGTTGATTG AATTGGCAAA GCGTCAGATT
AATAGTCTTT GGTTAGAAGC GGGAGAAACT TTAGCCGGTG CATTTATTGA GGAAAATTTA
GTGAATGAGC TCATTATTTA TATGGCACCA AAATTACTGG GTAATGAAGC TCGTGGTTTT
TGCCATTTGC CACATTTGAA GCGTTTAGCC GATGCACCAA AGTGGCAATT GTTATCTTTG
GCACAAATTG GCGAAGACAT TAAGTTGAAT TATCAGCGTC ACATTTTATG A
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| Protein sequence | MQPTFSAQDE YFMQIALELA KKGIFTTTPN PAVGCVLVKN GEIVGRGFHF KAGQPHAEVM
ALRDAGDRAK GATAYVTLEP CSHFGRTPPC AQGLIEAGIR NVIVAMKDPN PQVAGKGLAM
LQAAGIESAV GLLQEKAELL NKGFLTRMRT QKPFVILKMA ISLDGRTAMA NGESKWISGE
QARQDVQQER AKVSAILSTA KTVLADDPLL NLRWEQFPSE LQQNYKVEEV RQPVRIILDR
LHLVTPRHKL FQCQSPVWLV GDKERDMSAF PDYCQYIKLF PSNEHSYLEN LLIELAKRQI
NSLWLEAGET LAGAFIEENL VNELIIYMAP KLLGNEARGF CHLPHLKRLA DAPKWQLLSL
AQIGEDIKLN YQRHIL
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