Gene HS_1043 details

Gene Information

• Locus tag: HS_1043
• Symbol: ribA
• ID: 4240541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1149148
• End bp: 1149798
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638104604
• Product: GTP cyclohydrolase II
• Protein accession: YP_719255
• Protein GI: 113461186
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAAAA TTCAGTTAGT TGCTGAAGCT AAATTACCCA CCGAGTTCGG AATTTTCCGT 
ATTGTCGGCT TTGAGTTTCC AGATACTCAA AAAGAACATG TTGCTCTTGT AATGGGCGAT 
ATTAATGATG ATAAACCTGT TCTTGCACGT ATCCATTCAG AATGTTTAAC CGGCGACGCT 
TTACATAGCT TAAAATGTGA TTGCGGTTTC CAACTGGCGA CCGCATTACG CCAAATCAGC 
GAAGCAGGAC GAGGAGTATT GATTTATCAT CGTGAAGAAG GGCGTGGTAT TGGACTAATT 
AATAAAATTC GAGCTTACGC TTTGCAAGAT CAAGGATTGG ATACGATTGA GGCGAACCTT 
GCTTTAGGTT TTGCTGCTGA TGAACGCAAT TTTTCGGTTT GTGCCGATAT TTTTGCATTA 
CTGGGGGTAA AACAAGTACG TCTGCTCACA AATAATCCGA ATAAAATTGA AACCATGAAA 
AAATCCGGTA TCAATATTGT GGAGCGAGTA CCATTGAATG TAGGTGAAAA CCGCTATAAC 
ACAGAATATC TAGATACGAA AGCAAAAAAA ATGGGACACT TTATTGTGCA TAATAATGAA 
CAACATTTAA TCGCTTGTCC GCATTGCCAA GAAGAAATTC CGAAAAAATA A 

 

Protein sequence

MSKIQLVAEA KLPTEFGIFR IVGFEFPDTQ KEHVALVMGD INDDKPVLAR IHSECLTGDA 
LHSLKCDCGF QLATALRQIS EAGRGVLIYH REEGRGIGLI NKIRAYALQD QGLDTIEANL 
ALGFAADERN FSVCADIFAL LGVKQVRLLT NNPNKIETMK KSGINIVERV PLNVGENRYN 
TEYLDTKAKK MGHFIVHNNE QHLIACPHCQ EEIPKK