| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1036 |
|---|
| Symbol | |
|---|
| ID | 4240534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1142526 |
|---|
| End bp | 1143902 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638104597 |
|---|
| Product | metalloprotease |
|---|
| Protein accession | YP_719248 |
|---|
| Protein GI | 113461179 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0193125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGC ACATTAAATT AGCTAGAGAT AGACGCAAAA AGAAATTCTA CATAAAAGTT
GCCGTTTTTT TTGTAGCTAT TTTATTTATT CTAATGGGTA TAGGGTTGTT CTTGAGAAAC
GATGTTTCTT CTCAGAAGCC TACATCTGTT GATATGCAAA TTGCAAATGA AAAAAATAAC
AGTGAATTGT CTTATGATGA TTTAGACGGT TTAGATGATG AAACGGATCA AGTTAATTTG
GATAATGAAA TATCATCATT GCCTGATAAT GCCAAAGATG CGTTAAATAG TTTATTAGAT
GCAGCGGATC AGGCAATGCG GATTAAAGAT CAATTTTCTC ATACTGTTGT ACGTGGCGAT
AAATTGAAAG ATGTATTGGA ACATTCAGGG TTGGATGAGG AAATAAGTCG TCAAATGATA
GCGAATTATC CGGAATTAAA AAATCTGAAA GCTGGCCAAC AAATTTATTG GATATTGGAT
AATGATGGAA ATTTGGAATA TTTAAATTGG CTTGTTTCCG AACGTGAAGA ACGTATTTAT
GAGCGAGTTA ATGAATCTCA GTTTAAACGT CAAATTTTAG AAAAGAAAAG TGTTTGGACA
GAAGAGGTTC TAAAAGGACA GATAGAAGGA TCATTTTATG CCAGTTTGAA AGCCTTGGGC
TTGAGCAGTA AACAAATTGC TCAATTAACT ACCGCACTTC AGTGGCAGGT AAGTCTTAAT
AAGTTAAAAA AAGGGGATAA GTTTGCCGTT TTAGTTTCGA GAGAGTATTT AGATAATAAA
TTGACTGGGC AAGGCAAGGT CGAAGCCATA CATATTATGT CTGGTGGAAA AAGTTATTAC
GCAATCCAAG CAAATAATGG ACGCTATTAT AGTCGTCAGG GAGAAACTTT AGGGAAAGGT
TTCGCACGTT ATCCTTTATT ACGTCAAGCT AGGGTGTCTT CTCCTTTTAA TCTTGCTCGC
CGTCATCCCG TTACAGGAAA AATACGACCG CACAAAGGGG TTGATTTTGC TGTACCTGTA
GGCACGACTA TCATCGCTCC GGCAGATGGA GTAGTAGAGA AAGTCGCTTA TCAGGCTAAC
GGTGCCGGAC GTTATATGAT GATTAGACAT GGCAAAGAAT ATCAGACAGT CTATATGCAT
TTAAGTCGCT CATTAGTCAA ACCGGGGCAA TCGGTAAAAA GAGGACAACG TATAGCATTA
TCGGGAAATA CCGGACGTTC AACCGGTGCT CATTTACATT ACGAATTTCA TATTAACGGT
AGACCTGTTA ACCCGTTAAC AGTGAAATTA CCGGGAACAA GTAATCAAAT GGCAAGTCAT
GAAAGAAAAG AATTCTTAGT TAAAGCAAAA AAAATGGAAA ACCTGCTTAA ATTTTAG
|
|---|
| Protein sequence | MVQHIKLARD RRKKKFYIKV AVFFVAILFI LMGIGLFLRN DVSSQKPTSV DMQIANEKNN
SELSYDDLDG LDDETDQVNL DNEISSLPDN AKDALNSLLD AADQAMRIKD QFSHTVVRGD
KLKDVLEHSG LDEEISRQMI ANYPELKNLK AGQQIYWILD NDGNLEYLNW LVSEREERIY
ERVNESQFKR QILEKKSVWT EEVLKGQIEG SFYASLKALG LSSKQIAQLT TALQWQVSLN
KLKKGDKFAV LVSREYLDNK LTGQGKVEAI HIMSGGKSYY AIQANNGRYY SRQGETLGKG
FARYPLLRQA RVSSPFNLAR RHPVTGKIRP HKGVDFAVPV GTTIIAPADG VVEKVAYQAN
GAGRYMMIRH GKEYQTVYMH LSRSLVKPGQ SVKRGQRIAL SGNTGRSTGA HLHYEFHING
RPVNPLTVKL PGTSNQMASH ERKEFLVKAK KMENLLKF
|
|---|
| |