| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1008 |
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| Symbol | lysS |
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| ID | 4240501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1110793 |
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| End bp | 1112283 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104564 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_719219 |
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| Protein GI | 113461151 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAC TGACTAACAT TAACGAACAT GAAGTACGTA GGAATAAACT GGCATATATT
CGTGAAACAG AAAATTTCGC CTTTCCAAAT GATTTTCGGC GCTCTCATTA TGCTGTTGAA
TTACACAACA AATATGATCA AACCACAAAA ATTGAATTGG AAATGTTGAA GGTGAATGTA
GCTGTCACTG GACGAATTAT GACAAAACGT TTTATGGGCA AAATCGCATT TATTACTTTA
AAAGATGGTG ACAGTTCTAT TCAATTATAT ATTTCACAAG ATATAGTTTC TAATGCAGAA
TTTGAAAAAT TTAAGAAATG GGATATTGGT GACATTGTCG GTGTGGAAGG AGCGGTGTTT
AAAACAAATA CAGATGAGTT ATCCATTAAT ACTAAAAAAG CTCGATTATT AACCAAAGCT
TTAAGACCTC TACCAGATAA ATTTCATGGT CTGTCAGATC AGGAAATGCG TTACCGCCAA
AGATATGTGG ATCTAATTGT AAATGAAAAA TCCTATAATA CTTTTAAATT GAGATCTAAA
ATACTTGCAG AGATTAGGAA TTATATGGTA TCTAATGGAT TCATGGAAGT TGAAACACCT
ATGATGCAAG TTATTCCAGG TGGAGCATCA GCGAGACCTT TCATTACTCA TCATAATGCT
TTAAATAGCG ATTTATATTT GCGGATTTCA CCAGAGCTGT TTTTAAAAAG ATTAATTGTG
GGTGGATTCG ATAGGGTATT TGAAATTAAT AGAAATTTCC GCAATGAAGG GATTTCTCCA
CGCCATAATC CTGAGTTTAC TATGATGGAA TTATATATGG CTCATGCGGA TTACAGAGAT
CTGATTAAGT TAACAGAAAA TTTATTCAGA ACAGTGGCGA TTAATACGCT AGGTTCTCCA
ATTGTAAAAT ATGGTAATAT TGAGTTTGAT TTTAGCAAAC CTTTCGTTCA GATGACTATG
AGAGAAGCTA TTATACATTA CGGCAATGAT ATTCAACTTG ATGATATTAT GTCCTACGAA
AGTGCGGTTA AAATTGCACA AAAATTAGGT ATTCAAGTAG AAAAAAGTTG GGGATTAGGA
AGATTACAAT CGGAGATTTT TGAAGAAGTA GCTGAAAAAC ATCTGATTCA ACCAACATTT
ATCACTGAAT ATCCTGCGGA AATTTCGCCA TTGGCAAGAC GCAATGATAT TGACCCAGAA
TATACCGACA GATTTGAGTT TTTCATTGGT GCAAGAGAAA TAGGTAATGG TTTCTCAGAA
TTAAATGATG CGGAAGATCA AGCGGAGCGT TTTAGAGATC AAGTTAAAGC TAAAGAAGCT
GGTGACGATG AAGCAATGTT CTATGACGAT GATTATGTTA TTGCTTTAGA ATACGGTATG
CCTCCAACGG CTGGTTTAGG AATTGGGATA GATAGAATGG TGATGCTATT AACTGATAGC
CATACCATCC GAGACGTTAT TTTATTTCCA ACCTTAAAGC CAACGGAATA A
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| Protein sequence | MAELTNINEH EVRRNKLAYI RETENFAFPN DFRRSHYAVE LHNKYDQTTK IELEMLKVNV
AVTGRIMTKR FMGKIAFITL KDGDSSIQLY ISQDIVSNAE FEKFKKWDIG DIVGVEGAVF
KTNTDELSIN TKKARLLTKA LRPLPDKFHG LSDQEMRYRQ RYVDLIVNEK SYNTFKLRSK
ILAEIRNYMV SNGFMEVETP MMQVIPGGAS ARPFITHHNA LNSDLYLRIS PELFLKRLIV
GGFDRVFEIN RNFRNEGISP RHNPEFTMME LYMAHADYRD LIKLTENLFR TVAINTLGSP
IVKYGNIEFD FSKPFVQMTM REAIIHYGND IQLDDIMSYE SAVKIAQKLG IQVEKSWGLG
RLQSEIFEEV AEKHLIQPTF ITEYPAEISP LARRNDIDPE YTDRFEFFIG AREIGNGFSE
LNDAEDQAER FRDQVKAKEA GDDEAMFYDD DYVIALEYGM PPTAGLGIGI DRMVMLLTDS
HTIRDVILFP TLKPTE
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