| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1007 |
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| Symbol | cadA |
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| ID | 4240500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1108445 |
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| End bp | 1110571 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638104563 |
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| Product | L-lysine decarboxylase |
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| Protein accession | YP_719218 |
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| Protein GI | 113461150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0720093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA TACTCATTGG ATACTCAATG TATAATGATC ATTTGCAGAA TTTAATTTCA
GCATTGGAAG AAAAGGGGTA TAAAACTACC GCAGTAGATG GTCATCAAGA AATTTTGCAT
GCAGTGAAAA ATAATGCAAG TATCATTTCT GTGATATTAA GCAATGATAT TATAGATAAA
GATCTGACTG ACAAGATACT TTTACTAAAT GAGGACCTGC CAATCTTTTC GTTAAAAGAC
ACAGATGATT TAAACGAGAA TTTAGATTTT GCAACAATTG GGCACCATGT TCAGTTTGTT
GACTGCAATT TATATACTCT CGATGAGATT ATTCATAAGA TAGAAAGAGC GGTAGAAAAA
TATTTTGATT CAATTACACC ACCACTTACT AAAGCATTAT TTAAATATGT TAATGAGGAT
AAATATACAT TTTGTACCCC AGGACATATG GGAGGAACAG CATTTTTACG TTCTCCGATA
GGTAGTGTTT TCTATGATTT TTTTGGTAAA AATACCTTTA AATCTGATAT TTCGGTCTCT
GTTGGTGAGT TGGGTTCTTT ATTGGATCAT AGTGGACCAC ATAAGGAAGC TGAAAAGTAC
ATTGCAAATG TATTTAATGC AGATAGAAGT TATATTGTGA CTAACGGAAC CTCAACCGCA
AATAAAATTG TTGGTATGTA TTCTGCTCCC TCAGGTAGCA CTGTTTTAAT TGATCGTAAT
TGTCATAAAT CCTTGACTCA TTTACTTATG ATGAGCGATG TTACACCGAT TTACTTAAAA
CCGACAAGAA ATGCTTATGG TTTACTTGGT GGCATTCCTG AGCAAGAGTT CTCAAAATCT
GCAATAGAGA AAAAATTAGC AGACATTGAT AATCCGAATT GGCCTGTCCA TGCTGTTATT
ACTAATTCAA CTTATGACGG TCTATTTTAT AACACAGACA AAATTAAGGA AACTCTTGAT
GTAAAATCTA TTCATTTCGA TTCAGCATGG GTTCCATATA CTAATTTCAA TCCGATTTAT
GAAGGTAAAA CAGGTATGGG CGGTAAGCGA GTTGAAGATA AAATTATCTA TGAAACACAA
TCCACTCACA AATTACTTGC TGCATTTTCT CAAGCTTCAA TGATCCATAT TAAAGGTCAA
ATAAATGAGG AAACTTTCAA TGAAGCCTAT ATGATGCATA CTTCAACCTC TCCACACTAT
GGTATTGTAT CGTCTACGGA AGTGGCTGCA GCCATGATGA AAAACAATAC AGGAAAACAA
TTACTGCAAG ATGCTATAAC AAGAGCGGTC AGATTTCGTA AAGAAATTAA GCAACGCATG
CGAGAATCTC AATCTTGGTA TTTTGATGTA TGGCAACCTG AAAATATTTC TTCGACAGAG
TGTTGGGAAT TAAAACCGGG TGAGTCATGG CATGGATTTA CTAATATTGA CAAGCATCAT
ATGTATTTAG ATCCAATCAA GGTAACTTTA TTAATGCCTG GCTTGAATAA AGACAACACC
TTGGACCCCA ACGGTATTCC AGCAACACTG GTATCCAACT ACCTGGATTC TAAAGGAATT
ATTGTTGAAA AAACAGGTCC TTATAATATT CTTGTGTTAT TTAGTATCGG TATTGACGAT
ACAAAAGCGA TGAGCCTAAT TCAAGCATTA GATGACTTTA AATCATTGTA TGATGCCAAT
GTGCTTGTGA AAGATATTTT ACCAAATATC TATGCCCATG CTCCTAAGTT CTATGAAACA
ATGCGTATTC AAGAATTGGC AGGAGGAATC CATCGTTTGA TATGTAAGCA TAATTTACCA
GATTTAATGT TCAAAGCATT TGATATATTG CCAAAAATGA TTATGACGCC TAACAAAGCT
TTTAATTTAG AATTGAAAGG AAATATTGAT GAATGCTATG TAGAAGATAT GGTTGGCAAA
ATCAATGCAA ACATGATATT ACCTTATCCT CCTGGTGTTC CTTTAATTAT GCCTGGTGAG
ATGATCACTG AAGAAAGTCG TGCTATTTTA GAGTTTCTGG TCATGCTATG TGAAATAGGA
ACCCATTATC CTGGTTTTGA AACGGATATT CATGGTGCAT ATCGTCAAGA CGATGGTCGC
TACAAAGTAA AAATTATTAA TATTTAA
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| Protein sequence | MKQILIGYSM YNDHLQNLIS ALEEKGYKTT AVDGHQEILH AVKNNASIIS VILSNDIIDK
DLTDKILLLN EDLPIFSLKD TDDLNENLDF ATIGHHVQFV DCNLYTLDEI IHKIERAVEK
YFDSITPPLT KALFKYVNED KYTFCTPGHM GGTAFLRSPI GSVFYDFFGK NTFKSDISVS
VGELGSLLDH SGPHKEAEKY IANVFNADRS YIVTNGTSTA NKIVGMYSAP SGSTVLIDRN
CHKSLTHLLM MSDVTPIYLK PTRNAYGLLG GIPEQEFSKS AIEKKLADID NPNWPVHAVI
TNSTYDGLFY NTDKIKETLD VKSIHFDSAW VPYTNFNPIY EGKTGMGGKR VEDKIIYETQ
STHKLLAAFS QASMIHIKGQ INEETFNEAY MMHTSTSPHY GIVSSTEVAA AMMKNNTGKQ
LLQDAITRAV RFRKEIKQRM RESQSWYFDV WQPENISSTE CWELKPGESW HGFTNIDKHH
MYLDPIKVTL LMPGLNKDNT LDPNGIPATL VSNYLDSKGI IVEKTGPYNI LVLFSIGIDD
TKAMSLIQAL DDFKSLYDAN VLVKDILPNI YAHAPKFYET MRIQELAGGI HRLICKHNLP
DLMFKAFDIL PKMIMTPNKA FNLELKGNID ECYVEDMVGK INANMILPYP PGVPLIMPGE
MITEESRAIL EFLVMLCEIG THYPGFETDI HGAYRQDDGR YKVKIINI
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