| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0990 |
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| Symbol | secA |
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| ID | 4240483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1088177 |
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| End bp | 1090873 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638104546 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_719201 |
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| Protein GI | 113461133 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGAA CTATTGTTAC AAAAATCTTT GGTAGTCGTA ATGACCGAAT TTTACGTCGT
TTAAATAAAC AAGTGAGAAT TATCAATAAG TTAGAGGCTG AATTTGAGCT TTTAACCGAT
GAGGAATTGA AATCAAAAAC TACGGAATTT CGGACAAGAT TGAAAAATGG AGAAAAACTG
GAAAATTTAA TTCCGGAGGC ATTTGCAACC GTTCGTGAAG CTAGTAAACG TATTTTAGGC
ATGCGTCCTT TCGATGTGCA ATTAATTGGC GGTATGGTGT TAAACAATCG ATGTATTGCA
GAAATGCGTA CAGGTGAAGG AAAAACCTTA ACTGCAACCT TACCTTGTTA CTTAAATGCC
TTAACGGGAA AAGGTGTTCA TGTTGTTACC GTAAATGATT ACTTGGCTCG CCGTGATGCG
GAAACCAATC GCCCCTTATT CGAATTTTTA GGTATGACTG TAGGCATTAA TGTTCCGGGT
TTATCACCGG AGGAAAAACG TGCAGCCTAT GCAGCAGATA TTACTTACGC AACAAATAGT
GAATTGGGCT TTGATTATTT GCGGGATAAT CTTGCACATT CAGCTCAAGA TCGCTTTCAA
AAACACTTAC ATTATGCTTT AGTAGATGAA GTGGATTCTA TTTTAATTGA TGAAGCCCGT
ACGCCGTTAA TTATTTCCGG TCCGGCTGAA GACAGTTCCG AATTGTATAT GGCAATGGAT
AAACTGATTC CAATCCTTAT CCAACAAGAT AAAGAAGATA CTGAAGAATA TCAAGGTGAT
GGGGACTTTA CACTGGATCT GAAAAATAAA CAGGCTCATT TAACTGAGCG TGGACAAGAA
AAAATCGAGC AATGGTTAAT GGAAAAAGGC TTTATTAATG AAAATGAAAG CCTCTACTCC
CCAGCTCGTA TTTCTTTATT GCATCATATT TACGCTGCCC TACGAGCACA CAAACTATTT
GAGCGTGACG TAGATTACAT TGTAAAAAAC GGTGAAATTG TTATTGTTGA TGAACACACC
GGTCGTACAA TGGCTGGTCG TCGCTGGTCT GATGGCTTAC ATCAGGCAAT TGAAGCAAAA
GAAGGCGTTC AAATTCAAGG AGAAAACCAA ACCGTTGCTT CCATCACTTA TCAAAACTAT
TTCCGTCTGT ATGAAAAATT GGCAGGTATG ACAGGAACAG CGGATACTGA AGCATTTGAA
TTTCAACAAA TTTATGGTTT GGAAACCATC GTTATCCCAA CCAATAAACC AATGATTAGA
GATGATCGCA CTGATATTAT GTTTGAAAAC GAAAAATATA AATTTGATGC GATCATCGAG
GATATTAAAG ACTGTGTTGC ACGCAATCAG CCGGTATTAG TAGGTACGAT CTCTATCGAA
AAATCAGAGT TACTTTCCAA TGCACTAAAC AAAGCAGGCA TCAAGCATAA TGTTCTTAAT
GCCAAATTCC ATGCTCAAGA GGCTGAAATT ATCGCCAATG CAGGGTATCC AAGTGCGGTC
ACTATTGCGA CCAATATGGC AGGGCGAGGA ACCGACATTG TACTGGGCGG TAACTGGAAA
GCGGAAGTGG CTAAATTAGA CGATCCAACA GAAGAGCAAA TTGAGGAAAT TAAAGCCGCA
TGGCAAATTC GTCATGATAC AGTAAAACAA GCCGGTGGAT TACATATTAT TGGAACAGAA
CGTCATGAAT CCCGCCGTAT CGACAATCAA TTGCGTGGTC GTTCGGGTCG TCAAGGTGAT
CCCGGTTCTT CTCGTTTCTA CTTATCCTTA GATGATGCTT TAATGCGTAT TTATTTAACA
GAAGGTAAAT TAAACTTCAT GCGTAAAATG TTCACAGAAA AAGGTGAAGG CATGGAGTCA
AAAATGCTGG CGAAAGTGAT TGCTCAAGCA CAAGCAAAAG TTGAAGCACA TAACTTTGAC
GGACGTAAAA ATCTGCTTGA ATTTGATGAT GTTGCAAATG ATCAACGCCA TGCAATTTAC
GAACAACGTA ATGCCCTACT GGATAATGAA GATATTGCCG ACACTATTCA GGTCATTCGT
CAAGATGTCT TCAATCATGT CATTGATGAA TATGTTCCAC CGCACTCTTT GGAAGAACAA
TGGGATATTC CTGCTTTAGA AACCCGTTTG AAGCAAGACT TTGCTCTTGA TTTGCCGTTA
AGTAAATGGC TGGAGGAAGA CAATACTTTC AATGAAGATG TATTACGTGA ACGTGTTTTA
ACAGTTGCTA TTTCTGAATA TAAACGCAAA GAAGAATTGG TAGGTCAGGA AACTATGCGT
AATTTTGAGA AAGGCGTTAT GTTACAAACT CTTGATGAAC TATGGAAAGA GCATTTATCG
GCTATGGATC ATCTACGTCG AGGTATTCAT TTACGTGGTT ATGCACAAAA AGATCCGAAA
CAAGAGTACA AAAAAGAATC TTTCCAAATG TTTACTGACA TGTTAGATAC ATTAAAACTA
AGCGTCATTA CTACATTAAG CCGAGTACAA ATTCGTACTC AAGATGAAGT AGAAAAAGCG
GAACAGGCTC GTCAAAAAAT AGCTGAGCGT GAAAATGCCG CAATGCAATA CCAAAATAAT
GAAGGAACAT CATCACTTCA CGAAAAATCA GAACATAAGA TAGGACGCAA CGAATCTTGC
CCTTGTGGTT CCGGAAAAAA ATATAAGCAT TGCCATGGTA GCAAAGCAAA ATATTAA
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| Protein sequence | MLRTIVTKIF GSRNDRILRR LNKQVRIINK LEAEFELLTD EELKSKTTEF RTRLKNGEKL
ENLIPEAFAT VREASKRILG MRPFDVQLIG GMVLNNRCIA EMRTGEGKTL TATLPCYLNA
LTGKGVHVVT VNDYLARRDA ETNRPLFEFL GMTVGINVPG LSPEEKRAAY AADITYATNS
ELGFDYLRDN LAHSAQDRFQ KHLHYALVDE VDSILIDEAR TPLIISGPAE DSSELYMAMD
KLIPILIQQD KEDTEEYQGD GDFTLDLKNK QAHLTERGQE KIEQWLMEKG FINENESLYS
PARISLLHHI YAALRAHKLF ERDVDYIVKN GEIVIVDEHT GRTMAGRRWS DGLHQAIEAK
EGVQIQGENQ TVASITYQNY FRLYEKLAGM TGTADTEAFE FQQIYGLETI VIPTNKPMIR
DDRTDIMFEN EKYKFDAIIE DIKDCVARNQ PVLVGTISIE KSELLSNALN KAGIKHNVLN
AKFHAQEAEI IANAGYPSAV TIATNMAGRG TDIVLGGNWK AEVAKLDDPT EEQIEEIKAA
WQIRHDTVKQ AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSL DDALMRIYLT
EGKLNFMRKM FTEKGEGMES KMLAKVIAQA QAKVEAHNFD GRKNLLEFDD VANDQRHAIY
EQRNALLDNE DIADTIQVIR QDVFNHVIDE YVPPHSLEEQ WDIPALETRL KQDFALDLPL
SKWLEEDNTF NEDVLRERVL TVAISEYKRK EELVGQETMR NFEKGVMLQT LDELWKEHLS
AMDHLRRGIH LRGYAQKDPK QEYKKESFQM FTDMLDTLKL SVITTLSRVQ IRTQDEVEKA
EQARQKIAER ENAAMQYQNN EGTSSLHEKS EHKIGRNESC PCGSGKKYKH CHGSKAKY
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