Gene HS_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0960 
SymbolgltA 
ID4240453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1061754 
End bp1063037 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content37% 
IMG OID638104516 
Productcitrate synthase 
Protein accessionYP_719171 
Protein GI113461103 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAT TAACAGCAAA ACTTACACTT AGTGACGGAC GTGAATTTGA TTTAAATGTT 
CAACAAGGAA CGCTTGGATA CGATGCTGTT GACGTTCAAC CGTTAGTTAA AAATAAATTA
TTTACTTTTG ACCCCGGATT TATGTCAACT GCATCTTGCG TTTCCGAAAT CACCTATATA
GATGGTGATA ACGGCATACT GTTACATCGT GGTTATCCTA TTGCGGATCT TGCTAAAAAT
GCGGATTATT TAGAAGTTGC TCATCTACTG TTATTTGGAG AACGCCCGAA TAAAGAAGAA
TATGCCAACT TTATAAAGTT GGTCAAAAAT CATACTTTAG TACATGAGCA AATTTCTCGC
TTCTTCCATG GATTCCGTAG AGACTCTCAC CCTATGGCGA TTATGTGCGG GGTAAGCGGT
GCCTTAGCAG CTTTCTATCA TGATTCCTTG GATATTAATG ATATTGAACA CCGAGAATTA
ACAGCAATTC GTTTATTAGC GAAAATGCCA ACGCTTGCGG CGATGTGTTA TAAATATTCT
ATTGGACAAC CTTTTATGTT CCCATTAAAC AAACTTTCTT ATGCAGGAAA TTTTTTATAT
ATGATGTTCG CAACGCCTTG TGAACCTTAT GAAGTTAACC CTGTATTAGA AAAAGCGATG
GATAGAATTT TCATTTTGCA TGCAGATCAT GAACAAAATG CCTCAACATC TACAGTGCGT
ACCGCTGCTT CGTCCGGAGC AAACCCTTTT GCTTGTATCG CTGCAGGAAT TGCCTCTCTT
TGGGGACCGG CTCATGGGGG AGCAAATGAA GCTTGTATTA ACATGTTAGA AGAAATCGGT
TCTGTTGATC GTATTCCTGA ATACATTGCA CGAGCAAAAG ATAAAAACGA TCCTTTCAGA
TTAATGGGAT TCGGACATCG AGTTTATAAA AATTACGATC CTCGAGCTAA AGTGATGCGT
CAAACTTGCC ATGAAGTATT AAAAGAATTA AACATTCAGA CACCGCTCTT TGACGTTGCT
ATGGAATTAG AACGTATTGC GTTAAATGAT CCTTACTTTA TCGATCATAA ACTGTATCCA
AATGTCGATT TTTATTCAGG AATTATCTTG AAAGCAATAG GTATTCCGAC ATCAATGTTT
ACTGTTATTT TCGCTTTAGC TAGAACAGTA GGTTGGATTG CTCATTGGAA AGAAATGTTT
AAACCTGGCA ATATGAAGAT TGTACGCCCT CGTCAATTAT ACAAAGGACA TACAGAACGT
AACTTTGATG CCATTGAAAA ATAA
 
Protein sequence
MSKLTAKLTL SDGREFDLNV QQGTLGYDAV DVQPLVKNKL FTFDPGFMST ASCVSEITYI 
DGDNGILLHR GYPIADLAKN ADYLEVAHLL LFGERPNKEE YANFIKLVKN HTLVHEQISR
FFHGFRRDSH PMAIMCGVSG ALAAFYHDSL DINDIEHREL TAIRLLAKMP TLAAMCYKYS
IGQPFMFPLN KLSYAGNFLY MMFATPCEPY EVNPVLEKAM DRIFILHADH EQNASTSTVR
TAASSGANPF ACIAAGIASL WGPAHGGANE ACINMLEEIG SVDRIPEYIA RAKDKNDPFR
LMGFGHRVYK NYDPRAKVMR QTCHEVLKEL NIQTPLFDVA MELERIALND PYFIDHKLYP
NVDFYSGIIL KAIGIPTSMF TVIFALARTV GWIAHWKEMF KPGNMKIVRP RQLYKGHTER
NFDAIEK