| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0944 |
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| Symbol | lolC |
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| ID | 4240437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1044805 |
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| End bp | 1045995 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638104500 |
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| Product | lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_719155 |
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| Protein GI | 113461087 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.628268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTC CAATTTCTCT TTTTATTGCA TTACGCTATT GGCGGGCTAA AAGTGCGGAT
CACTTCGGGC AATTAGTTAC GACGCTTGCT ACCGTTGGTA TTATTTTAGG TGTTATGGCG
TTAATTATTG TTTTGTCTGT GATGAACGGC TTGGAAAAAT ATCAAAAACA ACAGGTTCTT
TCCAATATTC CGCACAGTAT TTTAATGCCT AAAAATAATT CTATATATTT GACCGCCTCG
CAACCGGACA TGCCCGATTT TGTGCAAAAA GTTGTGCCGA TTAATACAAC TTCTGTCGTG
TTTCAAACTG CACAAGGTGT CAGTGCTGGG CAAATTCTTG GGGTGCAAAA ATTTTCTGAT
GATCCTTTAT TGAGTGAGTT TTCAGAAAAT CATTTTTCGC AACTTCTTCC AATCGGTGAG
TTTAAATTAA TTATCGGTTG GAAATTGGCA CAAAAATTAA ACGTACAGAT TGGTGATAAA
GTTCGAGTGA TGGTGACGGA AAATAGCCAA TATACTCCCT TTGGTCGAGT TCCGGTACAA
CGTTTATTTA CCATTAGTGA TATTTACTCT TCCTTTTCTG AACAGGCAAG CTATGCAGTT
TTTGCCAATT TAGCGGATAT TGGACGCTTA ATGCGGATTA AACCTGAACA AGTTCAAGGT
TATCGCTTAT TTTTGCAAGA TCCTTTTTTC ATTAGTGAAT TGCCTAAGTT TTTCCCTACT
GAGCAATGGA AAATTGTAGA TTGGCGTAGT CAAAAAGGGG AGTTTTTCCA AGCAGTTCGC
ATGGAAAAGA ATATGATGAG TTTGTTAATT AGTTTAATTA TTGTGGTGGC GGTTTCTAAT
ATTGTTACTT CATTGAGTTT GATGGTGGTG GATAAACAAG GTGAAATTGC TATTTTACAA
ACACAGGGAT TGAGAAAAGG ACAAGTGCGT AATATTTTTA TTTTGCAAGG TTTTTTTGTA
GGGGCAAGCG GTGCTGTGTT AGGTGGCGGT TTAGGGGTTG TTGTAGCAAT GAATTTAGCG
AAGATTATTC AGTGGATTAA TCCTCAGGGT ATTTTTTTAC CGACAGAAAT TAACGTTTAT
CAAATTGCGT TAATTTTATT TTTCTCGTTA ACATTATCTT TAATATCAAC AATTTATCCA
GCTTACCGAG CGAGTAAAAT TGAGCCGGCA CAAGCATTAC GTTATGAATA A
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| Protein sequence | MTFPISLFIA LRYWRAKSAD HFGQLVTTLA TVGIILGVMA LIIVLSVMNG LEKYQKQQVL
SNIPHSILMP KNNSIYLTAS QPDMPDFVQK VVPINTTSVV FQTAQGVSAG QILGVQKFSD
DPLLSEFSEN HFSQLLPIGE FKLIIGWKLA QKLNVQIGDK VRVMVTENSQ YTPFGRVPVQ
RLFTISDIYS SFSEQASYAV FANLADIGRL MRIKPEQVQG YRLFLQDPFF ISELPKFFPT
EQWKIVDWRS QKGEFFQAVR MEKNMMSLLI SLIIVVAVSN IVTSLSLMVV DKQGEIAILQ
TQGLRKGQVR NIFILQGFFV GASGAVLGGG LGVVVAMNLA KIIQWINPQG IFLPTEINVY
QIALILFFSL TLSLISTIYP AYRASKIEPA QALRYE
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