| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0942 |
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| Symbol | lolE |
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| ID | 4240435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1042854 |
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| End bp | 1043969 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104498 |
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| Product | outer membrane-specific lipoprotein transporter subunit LolE |
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| Protein accession | YP_719153 |
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| Protein GI | 113461085 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family
[TIGR02213] lipoprotein releasing system, transmembrane protein LolE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.820237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGGTT TTGAGCGAGA ACTTAATCAG CGTATTTTAT CTGTTGTTCC ACATAGTGAA
ATTATATCGT ATCAAGAGCA AGGAAATGTC AAGATTGAAA GTCGACAAAA AATTACCGCA
CTTTTACAGC AGGATCCAAA TGTTTTAGCA CAATCCCCTT TTGTTGAATT TACGGCATTA
ATTGAAAACG GCACAAAACT GAAAGTAGCT CAAGTGAGGG GAATAGAACA AGTTACACAA
GATCAAGTGA GTAATTTGAG TAAATTTGTG TTAAATGATG GCTGGCAACA ATTTCAGAAA
AATGGCGGTT TGGTTTTAGG CTATGGCATT GCGAAAGAAT TAGGTGTATC CGAAAATGAT
TGGGTAACGT TATTAATTTC TTTTGCTAAT AGCGATAATC AATTATCTCA GCCTCTCCGT
TATCGCATTC AAGTAACAGG TATTTTGCGT TTAGATGGGC AATTGGATCA TAGTTATGCG
TTGATGAGCT TATCGCAAGC ACAAGTATTA TTGGATTATA CGCCCGATGA AATTACTGGG
GTTGAGCTAA AAGTTCAAGA TCCTTTTGCG GTTAGAAATA TGACGTATGA ATATTTATAT
GATTATCCGC AACGCCTACA AGTTCAAGAT TGGATTGGCA AGTTTGGTTA TATGTATAAC
GATATTCAGT TAATTAGAAC AGTAATGTAT ATTGCGATGG TGTTGGTGAT AGGTGTTGCC
TGTTTTAATA TTGTGTCAAC TTTGATTATG GCAGTAAAAG ATAAACAGGC TGATATTGCT
ATTATGCGTA CATTGGGGGC TAATAATCGT TTTATTAAAC AAATTTTTGT TTGGTACGGG
TTGCAATCAG GTATGAAAGG CTGTTTAGTT GGAATAGCAT TGGGGGTAAT ACTGAGTTTA
AATTTAACCG ATCTGATTCA ATTTATTGAA TTTTTACTGG ATAAAAAGTT ATTATCAGAT
GGAATTTATT TTATTGATTT TTTACCGAGC GAATTACATT GGCAAGATGT ACTTATGGTA
CTAGTGGTCG CTTTGATGTT GAGTTTATTG GCAAGTTTAT ATCCAGCAAG CCGAGCGGCT
AAATTACAAC CTGCACAAGT CTTAAGTGCG TACTAG
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| Protein sequence | MNGFERELNQ RILSVVPHSE IISYQEQGNV KIESRQKITA LLQQDPNVLA QSPFVEFTAL
IENGTKLKVA QVRGIEQVTQ DQVSNLSKFV LNDGWQQFQK NGGLVLGYGI AKELGVSEND
WVTLLISFAN SDNQLSQPLR YRIQVTGILR LDGQLDHSYA LMSLSQAQVL LDYTPDEITG
VELKVQDPFA VRNMTYEYLY DYPQRLQVQD WIGKFGYMYN DIQLIRTVMY IAMVLVIGVA
CFNIVSTLIM AVKDKQADIA IMRTLGANNR FIKQIFVWYG LQSGMKGCLV GIALGVILSL
NLTDLIQFIE FLLDKKLLSD GIYFIDFLPS ELHWQDVLMV LVVALMLSLL ASLYPASRAA
KLQPAQVLSA Y
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