| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0919 |
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| Symbol | kdsC |
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| ID | 4240412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1013679 |
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| End bp | 1014251 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638104475 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_719130 |
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| Protein GI | 113461062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.71015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTTTC GAGTTAATCC CATGATGTTA TTAAATGAAA AATTACAAAA AATTAAGTTG
GTTATTACCG ATATTGATGG TGTACTAACA GACGGCTTAT TGCATTATGA TGCCAACGGG
GAAGTAATGA AAAGTTTCCA TGTGCGTGAT GGACTGGGTA TCTGTATGTT AATCAAAAAT
GGCATTCAAG TTGCAGTCTT ATCTGGTCGA GACTCCCCTA TCTTACGTAA ACGCATTGCA
GACTTAGGCA TCAATTTATT TTTCTTAGGT AAATTAGAAA AAGAGAGTGC TTGTTTTGAA
TTAATCAAAA AAGCAGGTGT AACACCCGAA GAAACTGCAT ACATTGGTGA TGATAGCGTT
GATTTACCCG CATTTTCCGT TTGCGGATTG TCTTTTGCCG TAAATGATGC GATGGACTAT
GTGAAAGATT GTGCTGATCA TATTTTGAGT TTACCCGGAG GGAAAGGTGC CTTTCGAGAA
ATGTCTGATA TGATTTTAAA AGCCCAAGGA AAAGCAAGTG TCTATTCCAC AGCACAAGGT
ATTCTCAAAG CAGTTAACAA GATGGTGCAA TAA
|
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| Protein sequence | MNFRVNPMML LNEKLQKIKL VITDIDGVLT DGLLHYDANG EVMKSFHVRD GLGICMLIKN
GIQVAVLSGR DSPILRKRIA DLGINLFFLG KLEKESACFE LIKKAGVTPE ETAYIGDDSV
DLPAFSVCGL SFAVNDAMDY VKDCADHILS LPGGKGAFRE MSDMILKAQG KASVYSTAQG
ILKAVNKMVQ
|
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