| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0918 |
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| Symbol | kpsF |
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| ID | 4240411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1012730 |
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| End bp | 1013695 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638104474 |
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| Product | polysialic acid capsule expression protein, KpsF/GutQ family protein |
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| Protein accession | YP_719129 |
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| Protein GI | 113461061 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC TTTTCAATGA GGAAATGACG ATGAATTACT TACAAATCGC TCGAAATTCG
TTAGCTGCCG AGCAAAATGC TTTAGCCAAA CTTAGTCAAA ATTTAAATCA ACAGTTTAAT
CAGGTTGTTG AGCTTATTTT AAATTGTGAA GGACGATTAG TTGTTGGCGG AATCGGGAAA
TCCGGACTTA TTGGTAAAAA AATGGTTGCT ACATTTGCCT CAACAGGAAC ACCAAGTTTT
TTTCTACATC CAACAGAGGC TTTTCATGGT GATTTGGGCA TGTTAAAGCC TATTGACATT
GTGATGTTAA TCTCTTATAG CGGTGAAAGT GATGATGTTA ATAAATTGAT TCCCAGCTTA
AAAAATTTTG GCAATAAAAT CATTGCATTA ACAGGTAACC TAAATTCTAC TTTAGCAAAA
CATGCCGACT ATATCCTTGA TATCAGTGTT GAGCGTGAAG CTTGTCCCAA TAATCTGGCT
CCAACAACTT CGGCTTTAGT AACGTTAGCT TTAGGCGACG CTCTTGCGGT TTCTTTAATT
ACAGCTAGAA ACTTTCAACC AGCTGATTTT GCCAAATTTC ATCCAGGCGG TAGTCTTGGT
CGTCGTTTGT TATGTAGAGT GAAAGATCAA ATGCAAGTTC GTTTACCAAA AGTAACAGAA
AACACAAACT TTACTGATTG TTTAACCGTT ATGAATGAAG GTCGTATGGG GGTTGCTCTT
GTCATGGAAA ATGAAAATTT AAAAGGTATT ATTACCGATG GCGATATTCG CCGTGCATTA
AGTGCAAACG GAACTAATAC ACTTAACAAA ACAGCCAAAG ATCTTATGAC TTCCAATCCT
AAAACTATTA ACTATAATAC TTATCTGTCT GAAGCGGAAA ACTTTATGAA AGAGAAAAAA
ATTCATTCAT TAGTCGTTGT AGATGATCAG AATAAAGTGA TAGGTTTAGT TGAATTTTCG
AGTTAA
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| Protein sequence | MTALFNEEMT MNYLQIARNS LAAEQNALAK LSQNLNQQFN QVVELILNCE GRLVVGGIGK
SGLIGKKMVA TFASTGTPSF FLHPTEAFHG DLGMLKPIDI VMLISYSGES DDVNKLIPSL
KNFGNKIIAL TGNLNSTLAK HADYILDISV EREACPNNLA PTTSALVTLA LGDALAVSLI
TARNFQPADF AKFHPGGSLG RRLLCRVKDQ MQVRLPKVTE NTNFTDCLTV MNEGRMGVAL
VMENENLKGI ITDGDIRRAL SANGTNTLNK TAKDLMTSNP KTINYNTYLS EAENFMKEKK
IHSLVVVDDQ NKVIGLVEFS S
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