| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0904 |
|---|
| Symbol | ispA |
|---|
| ID | 4240396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 995529 |
|---|
| End bp | 996419 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104459 |
|---|
| Product | farnesyl-diphosphate synthase |
|---|
| Protein accession | YP_719114 |
|---|
| Protein GI | 113461047 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAT TTGCTCAAGA TCTCCAAGAA TCCAAACAAC GAATTAATTT TTTTTTAGAA
AAACAATTCG AGTGCATTGA TAGTTCTCCA TCTCCTTTAG CTGAGGCGAT GAAATATGGA
TTATTGTTAG GTGGAAAACG TATTCGCCCC TTTTTAGTTT ATGCAACAGG AAAAATGCTC
GGAGCGAATT TAATTCAATT AGATTATGCA GCAGCGGCTA TTGAAGCTAT TCATGCTTAC
TCACTCATTC ATGATGATCT TCCGGCTATG GATAATGATT CACTCCGTCG TGGACACCCA
ACTTGCCATA TTGCCTTTGA TCATGCTACC GCTATTCTTG CCGGCGATGC TTTACAACCT
TTTGCTTTTG AGCTGTTAAC TCAAACACCC GATTTGTCTG CCGAACAAAA ATTAGCTTTA
GTTCAAACTT TAGCCAATGC TTCTGGTGTT AAAGGTATGT GTTTAGGGCA AAGTTTAGAT
TTAATCTCAG AGAATCAACA AATTAATTTA TCCGCACTTG AAAAGATACA TCGCAATAAA
ACAGGTGCCT TGTTGTCAGC TGCGGTGAAG ATGGGGTTTA TTTGTTCTCC GCACTTTGCA
AATATAAAAT TAGAAGAACA ATTAATGCAC TACTCCTCTG CTGTGGGTTT AGCTTTTCAG
GTACAAGATG ATATTTTAGA TATTGAAGGT GAAAGTATAG TGATTGGAAA AACTGCCGGA
TCTGATCTCC TTGCCGATAA AAGTACTTAT CCAAAACTTA TAGGTTTAGA TGGTGCAAAA
CAGAAGGCAC GAGAACTTTA TCATCAAGCA CTACAAGAAT TGGATGCTTT GCCTTTTGAC
ACTTCAGCAT TACATGCACT CGCTGAGTTT GTCGTAAATC GACAAAGCTA A
|
|---|
| Protein sequence | MYQFAQDLQE SKQRINFFLE KQFECIDSSP SPLAEAMKYG LLLGGKRIRP FLVYATGKML
GANLIQLDYA AAAIEAIHAY SLIHDDLPAM DNDSLRRGHP TCHIAFDHAT AILAGDALQP
FAFELLTQTP DLSAEQKLAL VQTLANASGV KGMCLGQSLD LISENQQINL SALEKIHRNK
TGALLSAAVK MGFICSPHFA NIKLEEQLMH YSSAVGLAFQ VQDDILDIEG ESIVIGKTAG
SDLLADKSTY PKLIGLDGAK QKARELYHQA LQELDALPFD TSALHALAEF VVNRQS
|
|---|
| |