Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0889 |
Symbol | glgB |
ID | 4240381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 972861 |
End bp | 975284 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104444 |
Product | 1,4-alpha-glucan branching enzyme |
Protein accession | YP_719099 |
Protein GI | 113461032 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TTGTATCACA ATCTACCATT GATACTTTTT TTGATGGAAA ACATGCGGAT CCTTTTTCCG TGTTAGGTAT GCATGAAACG TCAAATGGGA TTGAAGTAAG GGTATTATTA CCGGATGCTG AAAAAGTATT TGTTCTCAGT AAAGAAACAA AAAATGTACT TTGTGAATTA TCGAGGGTAG ATGAACGTGG TTTTTTTGCC GGTGTTGTGC CTAATACGCA TAGTTTTTTT GCGTATCAAT TAGAAGTTTA TTGGGGAAAT GAAGCTCAAG TTATAGAAGA TCCTTACGCA TTTCATCCGA TGATTAATGA ACTTGATAAT TGGCTACTGG CAGAAGGCTC CCATAAACGC CCTTATGAAA TTTTAGGTGC ACATTTTACC GAATGTGACA ACGTAGCAGG TGTAAATTTT CGTCTGTGGG CACCAAACGC TAAACGTGTT TCGGTCGTAG GCGATTTTAA CTATTGGGAC GGTCGCCGGC ACCCAATGCG TTTTCATCAA TCTAGCGGTA TTTGGGAATT ATTTTTACCC AAAGTATCGT TGGGGCAACT GTATAAATTT GAGCTGTTAG ACTGTCATAA TCAATTACGC TTAAAAGCCG ATCCTTATGC CTTCAGTTCA CAATTACGTC CTGATACAGC ATCACAAATT GGGGCATTGC CTGAAATTGT ATCAATGACT GAAAAACGCC GAAAAGCTAA TCAAGCTGAT CAGCCGATTT CAATTTATGA AGTACATTTG GGTTCTTGGC GTCGTAACTT GGAAAATAAT TTTTGGCTGG ATTATGATCA AATTGCTGAG GAGCTTATTC CTTATGTAAA AGACATGGGA TTTACGCATA TTGAACTTTT ACCCCTGTCT GAATTTCCAT TTGACGGTTC GTGGGGTTAT CAGCCTATTG GTTTATATTC TCCGACTAGC CGTTTTGGTA CAGCCGAAGG TTTTAAACGT TTAGTGAATA AAGCTCATAA GGCTGGAATC AATGTGATTT TAGACTGGGT TCCAGGTCAT TTCCCAAGCG ATACGCACGG TTTAGTTGCT TTTGACGGTA CGGCTTTATA TGAACATGCG GATCCCAAAG AAGGTTATCA TCAAGATTGG AATACTTTGA TTTATAACTA CGGTCGTCAT GAAGTAAAAA ATTATTTGGC TTCGAATGCG TTGTATTGGA TGGAGCGATT TGGATTAGAC GGTATTCGAG TAGATGCGGT TGCGTCTATG ATTTATCGTG ACTATAGCCG TGAAGACGGG CAATGGATAC CAAATCAGTA TGGTGGTCGT GAAAATTTGG AGGCCATTGA ATTTTTGAAA CAAACTAATC ATTTATTGGG AACGGAAATT CCTGGTGTTG TATCAATTGC GGAAGAATCA ACCTCTTTTG CCGGTGTTAC TCATCCTCCG TATGAAGGTG GTTTAGGTTT TCATTTTAAA TGGAATATGG GTTGGATGAA CGATACATTG TCGTATATGA AAAAAGATCC GATTTATCGT CAACATCACC ATAGCCAAAT GACCTTTGGT ATGGTGTATC AATATAGTGA GAACTTTATT TTACCGCTTT CACATGATGA AGTTGTACAT GGTAAATGTT CATTACTCGG TAAAATGCCC GGAGATGCGT GGCAAAAATT TGCTAATTTA CGTGCATATT ATGGTTATAT GTGGGGTTAT CCGGGTAAAA AATTACTCTT TATGGGCAAT GAATTTGCTC AAGGCAGAGA ATGGAATTAT CAGGAAAGTT TGGATTGGTA TCTTCTTGAT GAATTTCATG GTGGTGGCTG GCATAAAGCT GTACAGGATT ATGTTAGAGA TCTTAATCAT ATTTATCAAA AAAATGCACC GCTCTTTGAG TTAGATACGG ATCCACAAGG TTTTGAATGG CTTGTTGTTG ATGATTATCA AAATTCCGTG TTTGTTTTTG AGCGTCGTAG TAAAAAAGAT GAACGTATTA TTGTTATCAG TAATTTCACC CCTGTTTTAC GTCAAAATTA CCGTTTTGGT GTAAATATTG CCGGTGAATA TATGGAAATT TTAAACTCCG ATGCACAACA GTATATGGGA TCAAATTCGA CAAATACGAG CAAAATTGTA ACTGAAGATA TTGAAAGTCA TAATAAAGCA CAATCTATCA GTATTGATAT CCCTCCTCTA GCAACAGTGT ATCTTAAACT GCATAAAGTA AAAAAAGTCA GAAAAATGAG AAAAACCTCG AAAGTTGAAG ATACAGCGGT GAAAACAGAG AAAAAAATAG CAAAGGGTAA AACCACGAGA ACCAAAAAAA CTGTCGCTGA TACTGTCTCT GAGGCAACAG AGGTTAAGCC TAAAAAGACG GTAACAAAAA GAGCGGTAGT TAAAAAAGTA AAAAATGCAG AGGTGATTGC AGAATCGACA TCAGTAGAAA ACAACGTTAG CTAA
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Protein sequence | MNKFVSQSTI DTFFDGKHAD PFSVLGMHET SNGIEVRVLL PDAEKVFVLS KETKNVLCEL SRVDERGFFA GVVPNTHSFF AYQLEVYWGN EAQVIEDPYA FHPMINELDN WLLAEGSHKR PYEILGAHFT ECDNVAGVNF RLWAPNAKRV SVVGDFNYWD GRRHPMRFHQ SSGIWELFLP KVSLGQLYKF ELLDCHNQLR LKADPYAFSS QLRPDTASQI GALPEIVSMT EKRRKANQAD QPISIYEVHL GSWRRNLENN FWLDYDQIAE ELIPYVKDMG FTHIELLPLS EFPFDGSWGY QPIGLYSPTS RFGTAEGFKR LVNKAHKAGI NVILDWVPGH FPSDTHGLVA FDGTALYEHA DPKEGYHQDW NTLIYNYGRH EVKNYLASNA LYWMERFGLD GIRVDAVASM IYRDYSREDG QWIPNQYGGR ENLEAIEFLK QTNHLLGTEI PGVVSIAEES TSFAGVTHPP YEGGLGFHFK WNMGWMNDTL SYMKKDPIYR QHHHSQMTFG MVYQYSENFI LPLSHDEVVH GKCSLLGKMP GDAWQKFANL RAYYGYMWGY PGKKLLFMGN EFAQGREWNY QESLDWYLLD EFHGGGWHKA VQDYVRDLNH IYQKNAPLFE LDTDPQGFEW LVVDDYQNSV FVFERRSKKD ERIIVISNFT PVLRQNYRFG VNIAGEYMEI LNSDAQQYMG SNSTNTSKIV TEDIESHNKA QSISIDIPPL ATVYLKLHKV KKVRKMRKTS KVEDTAVKTE KKIAKGKTTR TKKTVADTVS EATEVKPKKT VTKRAVVKKV KNAEVIAEST SVENNVS
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