Gene HS_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0889 
SymbolglgB 
ID4240381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp972861 
End bp975284 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content38% 
IMG OID638104444 
Product1,4-alpha-glucan branching enzyme 
Protein accessionYP_719099 
Protein GI113461032 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID[TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TTGTATCACA ATCTACCATT GATACTTTTT TTGATGGAAA ACATGCGGAT 
CCTTTTTCCG TGTTAGGTAT GCATGAAACG TCAAATGGGA TTGAAGTAAG GGTATTATTA
CCGGATGCTG AAAAAGTATT TGTTCTCAGT AAAGAAACAA AAAATGTACT TTGTGAATTA
TCGAGGGTAG ATGAACGTGG TTTTTTTGCC GGTGTTGTGC CTAATACGCA TAGTTTTTTT
GCGTATCAAT TAGAAGTTTA TTGGGGAAAT GAAGCTCAAG TTATAGAAGA TCCTTACGCA
TTTCATCCGA TGATTAATGA ACTTGATAAT TGGCTACTGG CAGAAGGCTC CCATAAACGC
CCTTATGAAA TTTTAGGTGC ACATTTTACC GAATGTGACA ACGTAGCAGG TGTAAATTTT
CGTCTGTGGG CACCAAACGC TAAACGTGTT TCGGTCGTAG GCGATTTTAA CTATTGGGAC
GGTCGCCGGC ACCCAATGCG TTTTCATCAA TCTAGCGGTA TTTGGGAATT ATTTTTACCC
AAAGTATCGT TGGGGCAACT GTATAAATTT GAGCTGTTAG ACTGTCATAA TCAATTACGC
TTAAAAGCCG ATCCTTATGC CTTCAGTTCA CAATTACGTC CTGATACAGC ATCACAAATT
GGGGCATTGC CTGAAATTGT ATCAATGACT GAAAAACGCC GAAAAGCTAA TCAAGCTGAT
CAGCCGATTT CAATTTATGA AGTACATTTG GGTTCTTGGC GTCGTAACTT GGAAAATAAT
TTTTGGCTGG ATTATGATCA AATTGCTGAG GAGCTTATTC CTTATGTAAA AGACATGGGA
TTTACGCATA TTGAACTTTT ACCCCTGTCT GAATTTCCAT TTGACGGTTC GTGGGGTTAT
CAGCCTATTG GTTTATATTC TCCGACTAGC CGTTTTGGTA CAGCCGAAGG TTTTAAACGT
TTAGTGAATA AAGCTCATAA GGCTGGAATC AATGTGATTT TAGACTGGGT TCCAGGTCAT
TTCCCAAGCG ATACGCACGG TTTAGTTGCT TTTGACGGTA CGGCTTTATA TGAACATGCG
GATCCCAAAG AAGGTTATCA TCAAGATTGG AATACTTTGA TTTATAACTA CGGTCGTCAT
GAAGTAAAAA ATTATTTGGC TTCGAATGCG TTGTATTGGA TGGAGCGATT TGGATTAGAC
GGTATTCGAG TAGATGCGGT TGCGTCTATG ATTTATCGTG ACTATAGCCG TGAAGACGGG
CAATGGATAC CAAATCAGTA TGGTGGTCGT GAAAATTTGG AGGCCATTGA ATTTTTGAAA
CAAACTAATC ATTTATTGGG AACGGAAATT CCTGGTGTTG TATCAATTGC GGAAGAATCA
ACCTCTTTTG CCGGTGTTAC TCATCCTCCG TATGAAGGTG GTTTAGGTTT TCATTTTAAA
TGGAATATGG GTTGGATGAA CGATACATTG TCGTATATGA AAAAAGATCC GATTTATCGT
CAACATCACC ATAGCCAAAT GACCTTTGGT ATGGTGTATC AATATAGTGA GAACTTTATT
TTACCGCTTT CACATGATGA AGTTGTACAT GGTAAATGTT CATTACTCGG TAAAATGCCC
GGAGATGCGT GGCAAAAATT TGCTAATTTA CGTGCATATT ATGGTTATAT GTGGGGTTAT
CCGGGTAAAA AATTACTCTT TATGGGCAAT GAATTTGCTC AAGGCAGAGA ATGGAATTAT
CAGGAAAGTT TGGATTGGTA TCTTCTTGAT GAATTTCATG GTGGTGGCTG GCATAAAGCT
GTACAGGATT ATGTTAGAGA TCTTAATCAT ATTTATCAAA AAAATGCACC GCTCTTTGAG
TTAGATACGG ATCCACAAGG TTTTGAATGG CTTGTTGTTG ATGATTATCA AAATTCCGTG
TTTGTTTTTG AGCGTCGTAG TAAAAAAGAT GAACGTATTA TTGTTATCAG TAATTTCACC
CCTGTTTTAC GTCAAAATTA CCGTTTTGGT GTAAATATTG CCGGTGAATA TATGGAAATT
TTAAACTCCG ATGCACAACA GTATATGGGA TCAAATTCGA CAAATACGAG CAAAATTGTA
ACTGAAGATA TTGAAAGTCA TAATAAAGCA CAATCTATCA GTATTGATAT CCCTCCTCTA
GCAACAGTGT ATCTTAAACT GCATAAAGTA AAAAAAGTCA GAAAAATGAG AAAAACCTCG
AAAGTTGAAG ATACAGCGGT GAAAACAGAG AAAAAAATAG CAAAGGGTAA AACCACGAGA
ACCAAAAAAA CTGTCGCTGA TACTGTCTCT GAGGCAACAG AGGTTAAGCC TAAAAAGACG
GTAACAAAAA GAGCGGTAGT TAAAAAAGTA AAAAATGCAG AGGTGATTGC AGAATCGACA
TCAGTAGAAA ACAACGTTAG CTAA
 
Protein sequence
MNKFVSQSTI DTFFDGKHAD PFSVLGMHET SNGIEVRVLL PDAEKVFVLS KETKNVLCEL 
SRVDERGFFA GVVPNTHSFF AYQLEVYWGN EAQVIEDPYA FHPMINELDN WLLAEGSHKR
PYEILGAHFT ECDNVAGVNF RLWAPNAKRV SVVGDFNYWD GRRHPMRFHQ SSGIWELFLP
KVSLGQLYKF ELLDCHNQLR LKADPYAFSS QLRPDTASQI GALPEIVSMT EKRRKANQAD
QPISIYEVHL GSWRRNLENN FWLDYDQIAE ELIPYVKDMG FTHIELLPLS EFPFDGSWGY
QPIGLYSPTS RFGTAEGFKR LVNKAHKAGI NVILDWVPGH FPSDTHGLVA FDGTALYEHA
DPKEGYHQDW NTLIYNYGRH EVKNYLASNA LYWMERFGLD GIRVDAVASM IYRDYSREDG
QWIPNQYGGR ENLEAIEFLK QTNHLLGTEI PGVVSIAEES TSFAGVTHPP YEGGLGFHFK
WNMGWMNDTL SYMKKDPIYR QHHHSQMTFG MVYQYSENFI LPLSHDEVVH GKCSLLGKMP
GDAWQKFANL RAYYGYMWGY PGKKLLFMGN EFAQGREWNY QESLDWYLLD EFHGGGWHKA
VQDYVRDLNH IYQKNAPLFE LDTDPQGFEW LVVDDYQNSV FVFERRSKKD ERIIVISNFT
PVLRQNYRFG VNIAGEYMEI LNSDAQQYMG SNSTNTSKIV TEDIESHNKA QSISIDIPPL
ATVYLKLHKV KKVRKMRKTS KVEDTAVKTE KKIAKGKTTR TKKTVADTVS EATEVKPKKT
VTKRAVVKKV KNAEVIAEST SVENNVS