Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0886 |
Symbol | glgA |
ID | 4240378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 967975 |
End bp | 969414 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104441 |
Product | glycogen synthase |
Protein accession | YP_719096 |
Protein GI | 113461029 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAT TACATGTTTG TTCCGAATTA TATCCATTAT TAAAAACAGG CGGATTGGCT GATGTAATGG GGGCTTTACC TTTTGCGCAA AATGAAATTG GTATTGATGC TAGACTTGTT TTACCGGCTT ATCCTGCTAT TTCTCGTGGT ATCCCCAATA CTGTGGTTGT TGCTGAGTTT AATAATTTTG CTGGACATGT TGTACTACGT TATGGTGAAT ACAATGGTAT TGGTGTTTAT TTAATCGATG CACCGCATTT ATATGCCCGT GAAGGTAATC CATATCATGA TATGTGGTAT AACGATTATA CGGACAACTA TAAGCGTTTT GCTTTATTGG CTTGGGTTGG GGCAGAGTTG GCTACAGGAT TAGACTTTTG GTGGCGTGCT GAAATTGTGC ATGCTCATGA TTGGCATGCA GGATTAACAG CTGCTTATTT GCATCATAAA GGACGTCCTG CTAAATCGGT GTTTACTATC CATAATTTAG CCTATCAAGG ACGTTTTTTA CCTTATCATC TAACTGAAAT TGGATTGCCT TGGTGGATGT TTAATGTAGA TGGATTGGAA TTATATGGTG AAATGTCTTA TTTAAAAGCC GGACTGTATT ATTCCGATAT TTCTACTGCA GTTAGTCCAA CCTATGCCAA AGAAATTACA ACACCTGAAT TTGCTTATGG TTTACAAGGG TTGTTGCAAA CTTTGAAAGC ACAGGGACGA TTGGTTGGTA TTTTGAATGG CGTAGATGAA AAAATTTGGC ATCCGTATAG TGATCCGTAT ATTGAAGATC ATTACAAATT GAAATCAATG CAGGGTAAAC GTAAGAATAA AATAAAATTA CAAGCTTATT TTAATTTACC ACAAAATCCT AATGCACTGT TATTTGTAAT GGTTACACGT CTAACAGAGC AAAAAGGTGT AGATTTACTA ATTGGTAGTG CTGAGAGAAT TGTACAACAA GGTGGGCAAT TAGCAATTTT AGGTTCCGGT TCAGCACATT TAGAAGCCGG TATTAATTGG CTTGCACAAG AGTATCCGGA AAATATCGCA GTAAAAATTG GATATGATGA AGCATTATCA CATTTAATGA TTGCCGGAGG AGATGTCATT CTTGTTCCAA GTCGTTTTGA GCCTTGTGGT TTAACGCAGT TATACGGATT AAAATATGGA ACTTTACCGT TAGTTCGTTC AACAGGTGGT TTGGCTGATA CTGTCATTGA TAGTAGCAGT GAAAACATCA AAGCACGTCA TGCAACAGGA TTTGTATTTA ATGATGCTGA TGTTGGGGGA TTATGTTATG GTATTGATAG TGCATTTACT TTGTGGCGTA AACCAAGTCA ATGGGAAAGT GTGATAGTCA ATGCTATGGA ACAGGATTTC AGTTGGCAGA CATCTGCAAA AGGATATCAA TCCCTATATG ATATTCTTTT ACATAAATAA
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Protein sequence | MKVLHVCSEL YPLLKTGGLA DVMGALPFAQ NEIGIDARLV LPAYPAISRG IPNTVVVAEF NNFAGHVVLR YGEYNGIGVY LIDAPHLYAR EGNPYHDMWY NDYTDNYKRF ALLAWVGAEL ATGLDFWWRA EIVHAHDWHA GLTAAYLHHK GRPAKSVFTI HNLAYQGRFL PYHLTEIGLP WWMFNVDGLE LYGEMSYLKA GLYYSDISTA VSPTYAKEIT TPEFAYGLQG LLQTLKAQGR LVGILNGVDE KIWHPYSDPY IEDHYKLKSM QGKRKNKIKL QAYFNLPQNP NALLFVMVTR LTEQKGVDLL IGSAERIVQQ GGQLAILGSG SAHLEAGINW LAQEYPENIA VKIGYDEALS HLMIAGGDVI LVPSRFEPCG LTQLYGLKYG TLPLVRSTGG LADTVIDSSS ENIKARHATG FVFNDADVGG LCYGIDSAFT LWRKPSQWES VIVNAMEQDF SWQTSAKGYQ SLYDILLHK
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